DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik2 and Smokl1

DIOPT Version :10

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:XP_218667.4 Gene:Smokl1 / 292948 RGDID:1560303 Length:494 Species:Rattus norvegicus


Alignment Length:417 Identity:142/417 - (34%)
Similarity:206/417 - (49%) Gaps:42/417 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 YDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRLKHPHIIKLYQ 205
            |.|.:.:|:|....|:|:.||:|...||:|.:.|   .:.:......||||||.|.|.:|:.|.|
  Rat    29 YTILKPLGQGGTTEVRLSSHRLTGTPVAVKALVK---HERHWASTMSEVEIMKILNHNNIVSLLQ 90

  Fly   206 VMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRDLKAENLL 270
            ||||:..|||:.|.|....:.:.:.|.||:.|..||..|.|::||:.|||.|||:|||||.:|::
  Rat    91 VMETEQNIYIIMEVAQGDSLLNRVQKAGRLKEDEARGIFVQLLSALGYCHGKGIIHRDLKPDNII 155

  Fly   271 LDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVLYVLVCGA 335
            :|.:.|:||.|||....|.||:.|...||:..:..||:|.|..|.||::|||:|||:||.:|.|.
  Rat   156 VDEHGNVKIIDFGLGAKFLPGQKLKRLCGAFQFIPPELFLGLPYDGPKVDIWALGVLLYFMVTGF 220

  Fly   336 LPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWM---CPELL 397
            .||.|:||..|...||.||:.||:.:|.:...:|..:|.:...:|.|...:..|.|:   ...|.
  Rat   221 APFSGTTLSELSKNVLQGRYDIPYNLSKDLRSMISLLLTVNARQRPTAQDLSSHPWLQEWGKTLT 285

  Fly   398 EHVLIAKYNLGAERQTSVEPSEDILRIMAEYVGIGSDKTRASLKKNTYDHVAAIYLLLQDRVSHK 462
            .|         :.|.||. |:.||: :..|.:|......:.|||...:|...|.||||  ||...
  Rat   286 FH---------SNRDTSF-PNRDIM-VAMENIGFHVQDIKESLKHKKFDETMATYLLL--RVQAC 337

  Fly   463 KEQSNGLGASALASSTSASRMIYSSRNDHQ-----PTQQQSQQQSKTISTSSILAKDQCHKRLSR 522
            :...|.:....|....:.    :.|..|..     |.::.|:...|.:..||             
  Rat   338 QNGGNYVQTKLLNPGVAP----FPSAADPDTFPLPPRRRASEPSLKIVVASS------------- 385

  Fly   523 HQTVLMSERNAHAGATP-TVPDPGPGY 548
            .|..|......:|...| ..|..|.||
  Rat   386 EQQRLRQSGGTNAPVQPKKTPVMGRGY 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 103/250 (41%)
UBA_SIK 418..458 CDD:270523 13/39 (33%)
Smokl1XP_218667.4 STKc_AMPK-like 28..276 CDD:270905 103/249 (41%)
UBA_MARK_Par1 295..332 CDD:270522 12/37 (32%)

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