DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik2 and Smok2a

DIOPT Version :9

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_001178548.2 Gene:Smok2a / 292316 RGDID:1565233 Length:501 Species:Rattus norvegicus


Alignment Length:457 Identity:138/457 - (30%)
Similarity:224/457 - (49%) Gaps:71/457 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 YDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRLKHPHIIKLYQ 205
            |.:..|||.|..|.||||.||:|...||:|::.|.   |...|:|..|||||.|:.||:|:.|.|
  Rat    27 YLVLNTIGHGFHAAVKLAVHRLTGTPVAVKMLLKR---QQWCQQVTSEVEIMMRINHPNIVSLIQ 88

  Fly   206 VMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRDLKAENLL 270
            |::|:.:.|::.|.|...:::.:|.:.|.:.|..||..|.|::|||.|||::||:|||||.:|||
  Rat    89 VIDTEKITYLIMELAKGNQLYSHIKEAGHLQEDEARGIFRQLLSAVGYCHEEGIIHRDLKPDNLL 153

  Fly   271 LDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVLYVLVCGA 335
            :|....|||.|||.:...:||:.|.|..|:..::|||:..||.|.||::|:|:|||:||.:..|.
  Rat   154 VDTKGRIKIIDFGSATQVRPGQKLRTPYGTYAFSAPELLLGKFYEGPKVDVWALGVILYYMTVGK 218

  Fly   336 LPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWM-------- 392
            :||:.:::..||.:::.|.:.:|..:|.|.:.|:..:|.:...:|.||..:..|.|:        
  Rat   219 VPFEAASIPLLRRQIVLGTYVVPPGLSEELQDLLSLLLKVNSQQRPTIPDLLTHPWLKIDSEGFP 283

  Fly   393 --CPELLEHVLIAKYNLGAERQTSVEPSEDILRIMAEYVGIGSDKTRASLKKNTYDHVAAIYLLL 455
              |.||:                .:.|...|||.|.: :|..:.:.:.||.:..::...|.|.||
  Rat   284 QPCKELI----------------PLRPDPAILRAMQD-IGFEAQEVKDSLDQKKFNQSMACYYLL 331

  Fly   456 QDR-------------------------VSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQ 495
            :.:                         .|.:..:|.|.....|.||:.:..........|:..:
  Rat   332 EKQALQECDNPTRPHPCMTPFPTLDYPATSVRGLRSRGSEPRWLGSSSDSQGSDLGQTPSHRLVK 396

  Fly   496 QQS---------QQQSKTIS-TSSILAKDQCHKRL-SRHQTVLMSE-----RNAHAGATPTVPDP 544
            :.|         :|.:.|:. |..|...|.|...: ||.:..:.:|     .:..|...|....|
  Rat   397 RASWPGGLLCRPRQIAPTVELTHRISISDPCFSSVHSRGKKTINTESTEDKSSDSAEVKPVASRP 461

  Fly   545 GP 546
            .|
  Rat   462 WP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 101/250 (40%)
S_TKc 141..392 CDD:214567 101/250 (40%)
Smok2aNP_001178548.2 STKc_AMPK-like 26..274 CDD:270905 101/249 (41%)
UBA_MARK_Par1 294..333 CDD:270522 12/39 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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