DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik2 and Mark1

DIOPT Version :9

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_001365805.1 Gene:Mark1 / 226778 MGIID:2664902 Length:796 Species:Mus musculus


Alignment Length:769 Identity:266/769 - (34%)
Similarity:377/769 - (49%) Gaps:166/769 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 EPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRLKHP 198
            |...:|.|.:::||||||||.||||||.:|..|||:|||||:||:.|:|||::|||.|||.|.||
Mouse    53 EQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 117

  Fly   199 HIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRD 263
            :|:||::|:||:..:|:|.||||.||:|||:..:|||.|..||.||.||:|||:|||:|.|||||
Mouse   118 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRD 182

  Fly   264 LKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVL 328
            |||||||||.:||||||||||||.|..|..|.|:||||||||||:|:||:|.|||:|:|||||:|
Mouse   183 LKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 247

  Fly   329 YVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWMC 393
            |.||.|:|||||..|:.||:|||.|::||||:||::||:|::::|||.|.:|.:::||.:.||| 
Mouse   248 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWM- 311

  Fly   394 PELLEHVLIAKYNLGAERQ---TSVEPSEDI-----LRIMAEYVGIGSDKTRASLKKNTYDHVAA 450
                        |:|.|.:   ...||..|:     :.||.. :|...|:...:|....||.|.|
Mouse   312 ------------NVGHEEEELKPYSEPELDLSDAKRIDIMVT-MGFARDEINDALVSQKYDEVMA 363

  Fly   451 IYLLLQDRVSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQQQSQQQSKTISTSSILAKDQ 515
            .|:|| .|...:.|....|.:.:|.                     |..:.|..::.|::  :..
Mouse   364 TYILL-GRKPPEFEGGESLSSGSLC---------------------QRSRPSSDLNNSTL--QSP 404

  Fly   516 CHKRLSRHQTVLMSER--NAHAGATPTVPDPGPGYYAKYGPLQLPLPLTGHS------------H 566
            .|.::.|..:....:|  :.|||  |::| |...|..:      |...:..|            .
Mouse   405 AHLKVQRSISANQKQRRFSDHAG--PSIP-PAVSYTKR------PQANSVESEQKEEWGKDTARR 460

  Fly   567 LTGYLNGGGVEVDASGIPLPMRYTPLPTAASPAPSN---------------CSSTSSRV-----G 611
            |.....|...||.||.:..|.|     ..::.:|||               |..::.|.     |
Mouse   461 LGSTTVGSKSEVTASPLVGPDR-----KKSTASPSNNVYSGGSMARRNTYVCERSTDRYAALQNG 520

  Fly   612 RHSLSSSSPRSHRPVAISLSIDNNPSLANLRCREMMEAGGGPV------------------GAVG 658
            |.|..:....|....|.|......|| |..|.::.|...|.|:                  .|..
Mouse   521 RDSSLTEMSASSMSSAGSTVASAGPS-ARPRHQKSMSTSGHPIKVTLPTIKDGSEAYRPGSAAQR 584

  Fly   659 VPLASKQLHQTISEFIIKQSTEDCRALLQQSTAVAEGKDDPPKAESSVGGVPPPASTT-PTSSTA 722
            ||.||...|.      |..||.|.....:.|::.:....:..:...|.....||||.: .|.:.|
Mouse   585 VPAASPSAHS------ISASTPDRTRFPRGSSSRSTFHGEQLRERRSAAYNGPPASPSHETGAFA 643

  Fly   723 GPESGSA---------------PCPGEINGKTIKTMSSS------SSFDSKANLGQSFRYKMSAE 766
            ....|::               |..||.:|:......||      ...:.|....:|.|:..|.:
Mouse   644 HARRGTSTGIISKITSKFVRRDPSEGEASGRADTARGSSGDPKERDKDEGKEAKPRSLRFTWSMK 708

  Fly   767 AS----------KLFQTLQESPLPVEQRTKRR-----VHVGSTNGSGGDSGQET 805
            .:          ::.:.|..:....||  |.|     ||        ||:.|::
Mouse   709 TTSSMDPNDMLREIRKVLDANTCDYEQ--KERFLLFCVH--------GDARQDS 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 160/251 (64%)
S_TKc 141..392 CDD:214567 160/250 (64%)
Mark1NP_001365805.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
STKc_MARK 59..311 CDD:270974 160/251 (64%)
UBA_like_SF 331..371 CDD:419673 12/41 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..498 28/157 (18%)
MARK1-3_C 697..794 CDD:213381 13/66 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000311
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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