DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik2 and Smokwl5

DIOPT Version :10

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:XP_038936416.1 Gene:Smokwl5 / 102551633 RGDID:7576862 Length:474 Species:Rattus norvegicus


Alignment Length:570 Identity:152/570 - (26%)
Similarity:244/570 - (42%) Gaps:159/570 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 KLKEPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRL 195
            |.||......|.|...:|:|:|..|.||.|..|:..||||::   ::.:..:..:..|..|::.|
  Rat     4 KSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKML---EISKETISSILSERAILETL 65

  Fly   196 KHPHIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIV 260
            .||:||:|:||:.|.:.:..|.|||..|.:|:.|.:.|.:.|..|:..|.|.:|||:|||...||
  Rat    66 HHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIV 130

  Fly   261 HRDLKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLG 325
            |||:|.:|:|.|...|.|:.|||.:..|:||.||...||:..:.|||:...:.|.|.:.|:||||
  Rat   131 HRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLG 195

  Fly   326 VVLYVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHR 390
            |:||.:..|..||.|.|.:.:..::.:|.:.||.:.|.:.|:||.::|.:.|..|.:|:.|::|.
  Rat   196 VLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHP 260

  Fly   391 WM--CPELLEHVLIAKYNLGAERQTSVEPSEDILRIMAEYVGIGSDKTRASLKKNTYDHVAAIYL 453
            |:  |...:..:....|.:       ||        |...:|..::|...||:|..||...|.||
  Rat   261 WVRKCEVNIPTITCPDYKI-------VE--------MLCGMGYNANKILESLQKKKYDEPMAAYL 310

  Fly   454 LLQDRVSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQQQSQQQSKTISTSSILAKDQCHK 518
            :|:|:|..:.|                                                      
  Rat   311 ILKDKVRQEIE------------------------------------------------------ 321

  Fly   519 RLSRHQTVLMSERNAHAGATPTVP-DPGPGYYAKYGPLQLPLPLTGHSHLTGYLNGGGVEVDASG 582
                           |...|..:| |.|            |||....:|.:           .||
  Rat   322 ---------------HGTTTSDMPVDQG------------PLPPQSPAHHS-----------VSG 348

  Fly   583 IPLPMRYTPLPTAASP--------APSNCSSTSSRVGRHSLSSSSPRSHRPVAI----------S 629
            :||..|      |:.|        .|      ..:|.||:::.|.  |..|:|:          :
  Rat   349 LPLKRR------ASEPNFGLLHIWPP------GEQVARHNVARSV--SMPPIALYGTKKQNSTST 399

  Fly   630 LSIDNNPSLANLRCREMMEAGGGPVGAVGVPLASKQLHQTISEFIIKQST 679
            .::.:.|..:...|..::|        :.:||.:||      :|.:|.|:
  Rat   400 SALHSRPVASPCVCNTILE--------IEIPLPTKQ------DFDMKTSS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 95/251 (38%)
UBA_SIK 418..458 CDD:270523 12/39 (31%)
Smokwl5XP_038936416.1 STKc_AMPK-like 13..261 CDD:270905 95/250 (38%)
UBA_MARK_Par1 275..314 CDD:270522 15/53 (28%)

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