DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik2 and mark3

DIOPT Version :9

Sequence 1:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster
Sequence 2:XP_031747282.1 Gene:mark3 / 100329119 XenbaseID:XB-GENE-867495 Length:794 Species:Xenopus tropicalis


Alignment Length:804 Identity:277/804 - (34%)
Similarity:387/804 - (48%) Gaps:220/804 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 EPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYREVEIMKRLKHP 198
            |...:|.|.:.:||||||||.||||||.:|..|||||||||:||:.|:|||::|||.|||.|.||
 Frog    49 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 113

  Fly   199 HIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKFWQIISAVEYCHKKGIVHRD 263
            :|:||::|:||:..:|:|.||||.||:|||:..:|||.|..||.||.||:|||:|||:|.|||||
 Frog   114 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKHIVHRD 178

  Fly   264 LKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVFEGKQYTGPEIDIWSLGVVL 328
            |||||||||.:||||||||||||.|..|..|.|:||||||||||:|:||:|.|||:|:|||||:|
 Frog   179 LKAENLLLDADMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 243

  Fly   329 YVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLVLEPTRRYTIDQIKRHRWMC 393
            |.||.|:|||||..|:.||:|||.|::||||:||::||:|::|.|||.|::|.|::||.:.||: 
 Frog   244 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPSKRGTLEQIMKDRWI- 307

  Fly   394 PELLEHVLIAKYNLGAER---QTSVEPSEDI-----LRIMAEYVGIG--SDKTRASLKKNTYDHV 448
                        |.|.|.   :..|||..||     :.||   ||:|  .::.:.||.|..||.:
 Frog   308 ------------NAGHEEDELKPFVEPELDISDQKRIDIM---VGMGYSREEIQESLSKMKYDEI 357

  Fly   449 AAIYLLLQDRVSHKKEQSNGLGASALASSTSASRMIYSSRND-HQPTQQQSQQQSKTISTSSILA 512
            .|.||||       ..:|:.|.||..:||::.|.......:| :..:.|....:.::||:|    
 Frog   358 TATYLLL-------GRKSSELDASDSSSSSNLSLAKVRPNSDLNNSSGQSPHHKGRSISSS---- 411

  Fly   513 KDQCHKRLSRHQTVLMSERNAHAGATPTVPDPGPGYYAKYGPLQLPLPLTGHSHLTGYLNGGGVE 577
              |..:|.|.|             |.|.||.                       :|.|       
 Frog   412 --QKQRRYSDH-------------AGPAVPS-----------------------VTAY------- 431

  Fly   578 VDASGIPLPMRYTPLPTAASPAPSNCSSTSS----RVGRHSLSSSSPRSHRPVAISLSIDNNPSL 638
                                |..|..|:|.:    .||:...|||:.|...|.:..|...:||:.
 Frog   432 --------------------PKRSQTSTTDNDLKDEVGQSRKSSSTGRGVTPPSPMLGNASNPNK 476

  Fly   639 ANLRCREMMEAGGGPVGAVGVPLASKQLHQTISEFIIKQSTEDC--RALLQQSTAVAEGKDDPPK 701
            |::..|:....         ||.::     :.|..:.:::|..|  ||...:.:.:..||     
 Frog   477 ADIPERKKSSV---------VPTSN-----STSSGMTRRNTYVCSERAPTDRHSVIQNGK----- 522

  Fly   702 AESSVGGV----PPPASTTPTSS--------------------------TAGPESGSAPCPGE-- 734
             |:|:.|:    ..|||....||                          :.|...|.|..|.:  
 Frog   523 -ENSLTGIFTYATSPASVCAISSIFARLRHPKSMSMSASRHSEMLPPIASEGDNFGPATIPDQRT 586

  Fly   735 -------INGKTI-------KTMSSSSSFDSKANLGQSFRY-------KMSAEASKLFQTLQESP 778
                   |...|.       :..:|.|:|..:....::..|       .:|.||:.|.||.....
 Frog   587 SVASTHSITSTTTPDRMRFPRGTASRSTFHGQLRERRTATYNGPPASPSLSHEATPLSQTRSRGS 651

  Fly   779 --------------LPVEQRTKRRVHVGSTNGSGGDSGQETNDAK-----------------SNG 812
                          ||.|.....| :.||:....||...|..::|                 .|.
 Frog   652 TNLFSKLTSKLTRRLPTESERNGR-YEGSSRNVSGDQKDENKESKPRSLRFTWSMKTTSSMDPND 715

  Fly   813 DSRSEKKVLAQGSSSTDEGCETDQ 836
            ..|..:|||...:      |:.:|
 Frog   716 MMREIRKVLDANN------CDYEQ 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 163/251 (65%)
S_TKc 141..392 CDD:214567 163/250 (65%)
mark3XP_031747282.1 STKc_MARK 55..307 CDD:270974 163/251 (65%)
UBA_MARK3_4 325..367 CDD:270590 17/51 (33%)
MARK1-3_C 695..792 CDD:213381 8/45 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000311
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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