DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and RDUF2

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001331469.1 Gene:RDUF2 / 836074 AraportID:AT5G59550 Length:512 Species:Arabidopsis thaliana


Alignment Length:199 Identity:40/199 - (20%)
Similarity:58/199 - (29%) Gaps:97/199 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICR----------------------- 49
            |.:|:|.|.|....:...|.|.||:||:..|.....:||:||                       
plant   304 CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDNAVGMT 368

  Fly    50 ---------------------------------------SQDA----AYFQLYLDFEEFPESASA 71
                                                   |||.    ::.:.:...|.......:
plant   369 IWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRISWVRSHGTLESDSNGTGS 433

  Fly    72 QGGSWGGH-----------------NRSQGHSSSSSSCSSNNNNSN--------DNSSSDDYIGI 111
            ..|| ||.                 |||...||::.|.||:|.:.|        |.|:|     :
plant   434 GSGS-GGRLRRMVRGMVSLMRRVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNS-----V 492

  Fly   112 MREY 115
            ||.|
plant   493 MRRY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 14/40 (35%)
RDUF2NP_001331469.1 zinc_ribbon_9 122..159 CDD:433910
RING-H2_RNF126-like 303..345 CDD:438329 14/40 (35%)
DUF1117 365..495 CDD:399509 22/135 (16%)
Blue background indicates that the domain is not in the aligned region.

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