DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and rnf149

DIOPT Version :9

Sequence 1:NP_001259169.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_012812754.1 Gene:rnf149 / 780151 XenbaseID:XB-GENE-972101 Length:398 Species:Xenopus tropicalis


Alignment Length:128 Identity:35/128 - (27%)
Similarity:57/128 - (44%) Gaps:24/128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAAYFQLYLDFEE-----FPE 67
            |.:|.|.::|.|.::...|.|.||..|:|.|..:.||||:|:.........:::.||     .|.
 Frog   265 CAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDVIKALGFWVEPEETVDIHVPV 329

  Fly    68 SASAQGGSWG------GHNRSQGHSSSSSSCSSNNNNSN-------------DNSSSDDYIGI 111
            |.:....|.|      ..:||:|::..|||..|:...||             |:..:|:..|:
 Frog   330 SIAGSSLSIGTVSITQEESRSEGNNLPSSSTGSSLQQSNSVKEDAGETTALLDDPGNDNTAGM 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_001259169.1 zf-RING_2 8..49 CDD:290367 16/40 (40%)
Prefoldin 112..>151 CDD:298833 35/128 (27%)
rnf149XP_012812754.1 PA_GRAIL_like 34..181 CDD:239037
UPF0233 <200..>220 CDD:299753
zf-RING_2 263..306 CDD:290367 16/40 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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