DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and Rnf130

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_038942740.1 Gene:Rnf130 / 652955 RGDID:1562041 Length:439 Species:Rattus norvegicus


Alignment Length:42 Identity:15/42 - (35%)
Similarity:26/42 - (61%) Gaps:0/42 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICR 49
            |.:|.|.::.:|.::...|.|.||:.|:|.|..:..|||:|:
  Rat   264 CAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 14/40 (35%)
Rnf130XP_038942740.1 PA_GRAIL_like 40..179 CDD:239037
HRD1 <197..366 CDD:227568 15/42 (36%)
RING-H2_RNF130 262..310 CDD:319717 15/42 (36%)
Blue background indicates that the domain is not in the aligned region.

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