DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and rnf150a

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:42 Identity:16/42 - (38%)
Similarity:27/42 - (64%) Gaps:0/42 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICR 49
            |.:|.|.::.:|.::...|.|.||.:|:|.|.:..||||:|:
Zfish   265 CAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 15/40 (38%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037
RING_Ubox 257..311 CDD:473075 16/42 (38%)
HRD1 <265..401 CDD:227568 16/42 (38%)
Blue background indicates that the domain is not in the aligned region.

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