DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and AT4G24015

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_974604.1 Gene:AT4G24015 / 2745724 AraportID:AT4G24015 Length:174 Species:Arabidopsis thaliana


Alignment Length:106 Identity:24/106 - (22%)
Similarity:38/106 - (35%) Gaps:36/106 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRNNVICTICSERFRTSDN-IQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAAYFQLYLDFEE 64
            :|..:.:|.:|...|...:. ::...|.|.||.||:..|.....|||:|||              
plant    98 LGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRS-------------- 148

  Fly    65 FPESASAQGGSWGGHNRSQGHSSSSSSCSSNNNNSNDNSSS 105
                                 |.|.||..::.::.||:..|
plant   149 ---------------------SVSISSTKTSVDDDNDHPDS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 13/42 (31%)
AT4G24015NP_974604.1 HRD1 <87..>174 CDD:227568 24/106 (23%)
RING-H2_EL5-like 105..147 CDD:438124 13/41 (32%)

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