DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and plr-1

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_499473.2 Gene:plr-1 / 176575 WormBaseID:WBGene00023404 Length:487 Species:Caenorhabditis elegans


Alignment Length:98 Identity:25/98 - (25%)
Similarity:41/98 - (41%) Gaps:16/98 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAAYFQLYLDFEEFPESASAQ 72
            |.||.|.:.....::...|||.||..|:|.|....|.||:|        |..:.::.:|:..|.:
 Worm   317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLC--------QFDVVYKHYPKVDSPE 373

  Fly    73 GGSWGGHNRSQGHSSSSSSCSSNNNNSNDNSSS 105
                    :..|.|..::|.....:.|.|..|:
 Worm   374 --------KLSGRSDDTTSLLPRTSPSEDLPSA 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 15/40 (38%)
plr-1NP_499473.2 RING-H2_RNF43-like 316..360 CDD:438328 17/50 (34%)
HRD1 <317..420 CDD:227568 25/98 (26%)

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