DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4325 and rnf128b

DIOPT Version :10

Sequence 1:NP_569969.1 Gene:CG4325 / 31167 FlyBaseID:FBgn0026878 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_021336982.2 Gene:rnf128b / 100536511 ZFINID:ZDB-GENE-100316-10 Length:400 Species:Danio rerio


Alignment Length:89 Identity:24/89 - (26%)
Similarity:42/89 - (47%) Gaps:17/89 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAAYFQLYLDFEEFPESASAQ 72
            |.:|::.::..:.:....|.|.:|:.|::.|..:..|||:|:     |..|....||        
Zfish   262 CVVCTDSYQRGEQVTVLPCRHLYHKKCIEPWLLEHPTCPMCK-----YNILKSSIEE-------- 313

  Fly    73 GGSWGGHNRSQGHSSSSSSCSSNN 96
                ..:::....||||||.|||:
Zfish   314 ----DSYDQPSPSSSSSSSSSSND 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4325NP_569969.1 RING-H2_TRAIP 7..49 CDD:438143 10/40 (25%)
rnf128bXP_021336982.2 PA_GRAIL_like 47..179 CDD:239037
COG5540 <188..303 CDD:227827 10/40 (25%)
RING_Ubox 260..308 CDD:473075 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.

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