DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and micall2

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001072513.1 Gene:micall2 / 779968 XenbaseID:XB-GENE-979747 Length:1023 Species:Xenopus tropicalis


Alignment Length:286 Identity:83/286 - (29%)
Similarity:132/286 - (46%) Gaps:54/286 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTA 211
            |.|.:.|..||:::...|::|::.|...||:|||||||::|:||||||::..|||:|..:|.:.|
 Frog     1 MAAIKALQQWCKQQCDGYRDVSITNMTTSFRDGLAFCAILHKHRPDLINFDLLSKENVYDNNHMA 65

  Fly   212 FDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQVGNVTHVPEPTRQYTYVPN 276
            |.|||:.|.||.:||.:|::....||..:|:||||.||:.|.|...:|.:..|..|       |.
 Frog    66 FSVAEEKLGIPALLDAEDMVKLRVPDRLSILTYVSQYYNYFHGRSPIGGLAGVKRP-------PP 123

  Fly   277 NYNAETAANRICK-VLKVNQENERLMEEYERLASDLLEW--------IRRTMPWLNSRQADNS-- 330
            :...|.|..::.. ||...|...|..:...|....:|:.        :|..:..::|..:.:|  
 Frog   124 DTVEEPAGKKVTNDVLPTPQATSRAPQPVPRTNVPVLKSNTVIENPPVRAGIREIDSNSSVSSNC 188

  Fly   331 -LAG-----VQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQT----------KLRLSNRPAYL 379
             :.|     ||:.:.:.:.|.|        ...|.:....|||.          ....:|....:
 Frog   189 MICGKHVHLVQRHMADGKLYHR--------NCFKCKQCSRTLQPGQYKAGDGLGSFICTNHHIAV 245

  Fly   380 PT------------EGKTVSDISNSW 393
            ||            .|.||.:..:||
 Frog   246 PTSPVTRTIMPAAPHGATVDEKKSSW 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 49/104 (47%)
SPEC 302..525 CDD:238103 22/130 (17%)
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
micall2NP_001072513.1 CH_MICALL2 2..107 CDD:409102 48/104 (46%)
LIM_Mical_like_1 188..242 CDD:188828 10/61 (16%)
Herpes_BLLF1 <396..785 CDD:282904
bMERB_dom 853..980 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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