DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and Smtnl1

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_077192.1 Gene:Smtnl1 / 68678 MGIID:1915928 Length:459 Species:Mus musculus


Alignment Length:102 Identity:40/102 - (39%)
Similarity:59/102 - (57%) Gaps:0/102 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 KEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTAFDV 214
            |..||.||:..|..|::|::|||..|:..|:|||||||:..|:..|||:|.......|...||..
Mouse   346 KNMLLEWCRAMTRNYEHVDIQNFSSSWSSGMAFCALIHKFFPEAFDYAELDPAKRRHNFTLAFST 410

  Fly   215 AEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHA 251
            |||..|..::|:.||::....||.:.:.||:...|.:
Mouse   411 AEKLADCAQLLEVDDMVRLAVPDSKCVYTYIQELYRS 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 40/102 (39%)
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
Smtnl1NP_077192.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..314
2A1904 <27..>233 CDD:273344
NESP55 <168..309 CDD:115071
CH_SMTNL1 344..459 CDD:409109 40/102 (39%)
Calmodulin-binding 441..459 1/7 (14%)
Blue background indicates that the domain is not in the aligned region.

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