DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actn and Sptbn5

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_036018336.1 Gene:Sptbn5 / 640524 MGIID:2685200 Length:3742 Species:Mus musculus


Alignment Length:941 Identity:269/941 - (28%)
Similarity:417/941 - (44%) Gaps:189/941 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MMENGLSM--EYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNS--HLRKAGTAIDNIEEDF 62
            ::.:.|:|  ||..|::.:         |.......|:||||.|.|:  .|.:.|..|.|:..:|
Mouse    76 LLSSSLAMDSEYEIGHVRK---------LQAQHTHMQEKTFTNWINNIFRLGRVGIRIQNLYTEF 131

  Fly    63 RNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTL 127
            .:|..|:.|||:||||.||.|..|::|.|.:.|.:.||.|:.:| |.:..||.|.||||:..:.|
Mouse   132 ADGAHLLRLLELISGEALPAPSPGRLRVHFLENNSHALAFLRAK-VPIPFIGPENIVDGDQSLIL 195

  Fly   128 GMIWTIILRFAIQDISVEE---------MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFC 183
            |::|.|||||.|..||::.         ::|||.||:|||||||.|.||::.:|..|:.|||.|.
Mouse   196 GLLWVIILRFQISHISLDREEFGASAALLSAKEALLVWCQRKTAGYTNVDITDFSRSWSDGLGFN 260

  Fly   184 ALIHRHRPDLIDYAKLSKDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCY 248
            ||:|.|||||:||..||.|.||.||:.||.|||:.|.|.::|||:| :....|||.:||||:|.|
Mouse   261 ALLHAHRPDLLDYGSLSPDRPLYNLSFAFRVAEQQLGIAQLLDPED-VAALHPDECSIMTYLSQY 324

  Fly   249 YHAFQGAQQVGNVTHVPEPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLE 313
            ||.|...|:                      ..||..|:.|:|...||.|.|..:|::|.:|||.
Mouse   325 YHYFSRLQR----------------------GHTAQRRLAKILLQLQETEVLQAQYKQLVADLLC 367

  Fly   314 WIRRTMPWLNSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAY 378
            ||......|.:|...:||..:::.|..:.::|.:.||||.:|:...|.....|||.||..||..:
Mouse   368 WIEEKKMQLEARDFPDSLPAMRQLLAAFASFRAREKPPRWQQRGATEALLFQLQTTLRAQNRRPF 432

  Fly   379 LPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQ 443
            ||.||...::::..|..||.||....:.:....::||||:.||::|:.||...|.:....|:|| 
Mouse   433 LPREGLGPAELAQRWAELERAEACRSQAMQQRLLQLERLDTLARRFQCKASHRESFLNDVEQML- 496

  Fly   444 SQDFRQCKLNE---LKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRIC 505
              |..:..|.:   ::|..::....|:.:...:.|.:.:..:|..|...|||....:..|.:.|.
Mouse   497 --DQARASLTDPATVEAATQRLSVLEAAILPQEGRFQALGEMADILRQEEYHSWADMARRQKEIT 559

  Fly   506 DQWDRLGALTQRRRTALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIV------- 563
            .:|.||....|..|..:::::.:|..:               ..::.....|.::.::       
Mouse   560 GRWRRLLRCLQEERKRMEDSKAVLSLL---------------QGVEAVTHQLGELQVLASSTVYG 609

  Fly   564 HTMEEIQGLIQAHDQFKATLGEADKEFNLIVNLVREVES--------------IVKQHQIPGGLE 614
            ..:.||..|:|:||..:|.:.........:|:...:::|              :.:.|.....|.
Mouse   610 QQLAEIVSLLQSHDLLEAQVSAHRTHVTHLVHQTTQLDSQGTSVEVLQAKALALAELHHSLVSLV 674

  Fly   615 NPYTTLTANDMTR-----------KW-SDVRQL----VPQRDQT-LANELRKQQ--NNEMLRRQF 660
            ....||....:.|           .| .:.|||    |..||.| :|..|:|.:  ..|:.|.|.
Mouse   675 RARRTLLEQTLQRAQFLRSCEEEEAWLQEHRQLMETAVLDRDLTQIATALQKHKALETELHRHQA 739

  Fly   661 A-----------------------EKANIV-GPW-------IERQMDAVTAIGMG---------- 684
            .                       |:|..| |.|       ..|:....||:.:|          
Mouse   740 VCVDLMQRGRNFSVREPLTQPDPLERAEAVQGTWQLLWAGAARRRARLQTALLIGQYFSDSAEAA 804

  Fly   685 -----LQGSLE------DQ-------LHRLKEYEQAVYAYKPNIEELEKIHQAVQESMIFENRYT 731
                 .|..||      ||       |..|: .||.|.|:...:.|||:  ||...:.:..:...
Mouse   805 SWLFQRQKQLESASCGKDQADAEALLLQHLR-LEQDVRAFAAELRELEE--QARAAAALVSHMVH 866

  Fly   732 NYTMETLRVGWEQLLTSINRNINEVEN-QILTRDSKGISQEQLNEFRSSFNHFDKNRTGRLSPEE 795
            ..|.:..|      |.|...|....|: :.|.||:.|..|.:.....:..:|:...:....|.||
Mouse   867 TGTWKGSR------LVSPTPNEEPPEDWKRLGRDTIGGPQGETQVLAAPGSHYSHQQIAFFSREE 925

  Fly   796 FKSC--LVSLGYSIGKDRQGDLDFQRILAVV 824
            ..:.  |..||           |.|..:|::
Mouse   926 APNTWKLEELG-----------DSQSRMAII 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063 44/105 (42%)
CH_ACTN_rpt2 139..252 CDD:409065 63/121 (52%)
SPEC 302..525 CDD:238103 65/225 (29%)
SPEC 420..647 CDD:238103 51/267 (19%)
SPEC 538..760 CDD:238103 60/321 (19%)
EFh 775..842 CDD:238008 10/52 (19%)
EFhand_Ca_insen 847..913 CDD:400872
Sptbn5XP_036018336.1 CH_SPTBN5_rpt1 83..207 CDD:409096 53/133 (40%)
CH_SF 222..330 CDD:412120 61/108 (56%)
SPEC 357..579 CDD:413338 65/224 (29%)
SPEC 474..685 CDD:238103 41/228 (18%)
SPEC 585..791 CDD:238103 36/220 (16%)
SPEC 795..>856 CDD:197544 16/63 (25%)
SPEC <976..1111 CDD:413338
SPEC 1223..1318 CDD:197544
SPEC 1324..1532 CDD:238103
SPEC 1538..1740 CDD:238103
SPEC 1669..1838 CDD:238103
SPEC 1842..2052 CDD:238103
SPEC 1952..2160 CDD:238103
SPEC 2161..2375 CDD:238103
SPEC 2276..2481 CDD:238103
SPEC 2484..2682 CDD:238103
SPEC 2588..2797 CDD:238103
SPEC 2800..3010 CDD:238103
SPEC 3011..3222 CDD:238103
SPEC 3223..3458 CDD:238103
SPEC 3462..>3630 CDD:238103
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D543832at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.