DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actn and Actn4

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_006540320.1 Gene:Actn4 / 60595 MGIID:1890773 Length:934 Species:Mus musculus


Alignment Length:934 Identity:617/934 - (66%)
Similarity:746/934 - (79%) Gaps:47/934 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDFRNGLKLML 70
            |.||  || ||.||::|:|:.||||||||||:||||||||||||||||.|:||:||||:||||||
Mouse    26 GGSM--GD-YMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLML 87

  Fly    71 LLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIIL 135
            ||||||||.||||:|||||.|||.||||||||||||||.|||||||||||||.||||||||||||
Mouse    88 LLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIIL 152

  Fly   136 RFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLS 200
            |||||||||||.:|||||||||||||||||||||||||:|:||||||.||||||||:||:|.||.
Mouse   153 RFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLR 217

  Fly   201 KDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQVGNVTHVP 265
            ||:|:.|||.||:|||||||||:|||.:|::||.:|||:|||||||.:||||.|||:        
Mouse   218 KDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQK-------- 274

  Fly   266 EPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWLNSRQADNS 330
                          ||||||||||||.||||||.|||:|||||||||||||||:|||..|....:
Mouse   275 --------------AETAANRICKVLAVNQENEHLMEDYERLASDLLEWIRRTIPWLEDRVPQKT 325

  Fly   331 LAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEGKTVSDISNSWKG 395
            :..:|:|||::|.|||.||||:|::|.:||.||||||||||||||||::|:||:.||||:|.|:.
Mouse   326 IQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNGWQH 390

  Fly   396 LELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKK 460
            ||.|||.:|||||.|..|||||:|||:||:.||..||.||.|||.||:.:|:....|:::|||.:
Mouse   391 LEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKQRDYETATLSDIKALIR 455

  Fly   461 KHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLGALTQRRRTALDEA 525
            |||||||||||||||||||||||||||.|:|:|..:||.|||:||||||.||:||..||.||::.
Mouse   456 KHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDNLGSLTHSRREALEKT 520

  Fly   526 ERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQFKATLGEADKEF 590
            |:.||.||.||||:||||||||||::...|||.|||||||:|||:|||.||||||:||.:||:|.
Mouse   521 EKQLETIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADRER 585

  Fly   591 NLIVNLVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTLANELRKQQNNEM 655
            ..|:.:.:|.:.|.:.:.|.....|||||:|...:..||..|:||||:||..|..|..|||:||.
Mouse   586 EAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEH 650

  Fly   656 LRRQFAEKANIVGPWIERQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNIEELEKIHQAV 720
            ||||||.:||:|||||:.:|:.:..|.:.:.|:|||||..||:||:::..|||:::.||:.||.:
Mouse   651 LRRQFASQANMVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPSLDLLEQQHQLI 715

  Fly   721 QESMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGISQEQLNEFRSSFNHFDK 785
            ||::||:|::||||||.:|||||||||:|.|.||||||||||||:|||||||:.|||:|||||||
Mouse   716 QEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDK 780

  Fly   786 NRTGRLSPEEFKSCLVSLGYSIGKDRQ----------------------GDLDFQRILAVVDPNN 828
            :..|.|.|||||:||:||||.:..|||                      ||.:|.||::|||||:
Mouse   781 DHGGALGPEEFKACLISLGYDVENDRQKQTGSMDSDDFRALLISTGYSLGDAEFNRIMSVVDPNH 845

  Fly   829 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILPDELRRELPPDQAEYCIQRMPPYK 893
            :|.|.|.||:|||:||:||||||:|||.||::||.||.:|..:|||||||||||||||.||.||:
Mouse   846 SGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQ 910

  Fly   894 GPNGVPGALDYMSFSTALYGETDL 917
            ||:..||||||.|||||||||:||
Mouse   911 GPDAAPGALDYKSFSTALYGESDL 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063 92/103 (89%)
CH_ACTN_rpt2 139..252 CDD:409065 88/112 (79%)
SPEC 302..525 CDD:238103 147/222 (66%)
SPEC 420..647 CDD:238103 135/226 (60%)
SPEC 538..760 CDD:238103 124/221 (56%)
EFh 775..842 CDD:238008 43/88 (49%)
EFhand_Ca_insen 847..913 CDD:430177 48/65 (74%)
Actn4XP_006540320.1 CH_ACTN_rpt1 48..152 CDD:409063 92/103 (89%)
CH_ACTN_rpt2 156..270 CDD:409065 89/113 (79%)
SPEC 297..518 CDD:238103 146/220 (66%)
SPEC 415..641 CDD:238103 135/225 (60%)
SPEC 533..755 CDD:238103 124/221 (56%)
PTZ00184 760..>891 CDD:185504 70/130 (54%)
EFhand_Ca_insen 864..930 CDD:430177 48/65 (74%)

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