DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actn and actn3a

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_571597.1 Gene:actn3a / 58037 ZFINID:ZDB-GENE-000329-9 Length:896 Species:Danio rerio


Alignment Length:916 Identity:612/916 - (66%)
Similarity:748/916 - (81%) Gaps:34/916 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MEYG-------DGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDFRNGL 66
            ::||       :.||.||::|:|:..|||||||||:||||||||||||||||.|:||||||||||
Zfish     8 VQYGSYMMTATEEYMIQEDDWDRDLFLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGL 72

  Fly    67 KLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIW 131
            |||||||.||||.|||||:||||||||||||||||||:||||.||||||||||||||||||||||
Zfish    73 KLMLLLEAISGERLPKPDKGKMRFHKIANVNKALDFISSKGVKLVSIGAEEIVDGNLKMTLGMIW 137

  Fly   132 TIILRFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDY 196
            |||||||||||||||.:||||||||||||||||:||||||||:|:|||||.||||||||||||||
Zfish   138 TIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQNFHISWKDGLALCALIHRHRPDLIDY 202

  Fly   197 AKLSKDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQVGNV 261
            :||.||:|:.|||||||:|||:||||:|||.||::|||||||:||||||||:||||.||:|    
Zfish   203 SKLRKDDPIGNLNTAFDIAEKFLDIPKMLDADDIVNTPKPDEKAIMTYVSCFYHAFAGAEQ---- 263

  Fly   262 THVPEPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWLNSRQ 326
                              ||||||||||||.||||||:||||||:|||:|||||:||:|||.:|.
Zfish   264 ------------------AETAANRICKVLAVNQENEKLMEEYEKLASELLEWIQRTIPWLENRV 310

  Fly   327 ADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEGKTVSDISN 391
            |:.::..:|:|||::|.|||.||||:|::|.:||.||||||||||||||||::|:|||.||||::
Zfish   311 AEQTMHAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIAD 375

  Fly   392 SWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELK 456
            :|||||..||.:|||||.|..|||||:|||:||:.|:..|:.||.||||:|..:|:....|.|::
Zfish   376 AWKGLEQVEKGYEEWLLTEIRRLERLDHLAEKFRQKSTLHQSWTTGKEELLSQKDYETASLMEIR 440

  Fly   457 ALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLGALTQRRRTA 521
            ||.:|||||||||||||||||||||||||||.|:::|..::||:||.||||||.||.|||:||.:
Zfish   441 ALMRKHEAFESDLAAHQDRVEQIAAIAQELNELDFYDAATINAQCQGICDQWDNLGTLTQKRRES 505

  Fly   522 LDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQFKATLGEA 586
            |:..|::.|.||.|:|||||||||||||:||..|||.||||||::||||.||.|||||||||.||
Zfish   506 LERVEKLWETIDQLYLEFAKRAAPFNNWMDGAMEDLQDMFIVHSIEEIQSLITAHDQFKATLPEA 570

  Fly   587 DKEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTLANELRKQQ 651
            |||...|:.:..||..|.:.:.|....|||||.|:..::..||..|:||||.|||.|..|:.:||
Zfish   571 DKERMAIMGIHSEVLKIAQTYGIKIVSENPYTVLSHQNIVNKWEAVKQLVPMRDQMLQEEVARQQ 635

  Fly   652 NNEMLRRQFAEKANIVGPWIERQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNIEELEKI 716
            :||.||||||.:|||:||||:.:|:.::.:.:.:.||||:|:..||.|||.:..||.||::||..
Zfish   636 SNERLRRQFAAQANIIGPWIQTKMEEISHVSIDIAGSLEEQMSNLKTYEQNIINYKSNIDKLEGD 700

  Fly   717 HQAVQESMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGISQEQLNEFRSSFN 781
            ||..||.:||:|::||||||.:|||||||||:|.|.||||||||||||:||||||||||||:|||
Zfish   701 HQLSQEGLIFDNKHTNYTMEHVRVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRASFN 765

  Fly   782 HFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRILAVVDPNNTGYVHFDAFLDFMTREST 846
            |||:.|.|.:.|::|::||:|:||.:     |:::|.||:.:|||||||.|.|.||:||||||:.
Zfish   766 HFDRKRNGMMDPDDFRACLISMGYDL-----GEVEFARIMTLVDPNNTGVVTFQAFIDFMTRETA 825

  Fly   847 DTDTAEQVIDSFRILAADKPYILPDELRRELPPDQAEYCIQRMPPYKGPNGVPGALDYMSFSTAL 911
            :|||||||:.||:|||:||.||..:||||||||:||||||.||..|.|.:..||||||:|||:||
Zfish   826 ETDTAEQVMASFKILASDKAYITVEELRRELPPEQAEYCISRMTKYMGGDAPPGALDYISFSSAL 890

  Fly   912 YGETDL 917
            |||:||
Zfish   891 YGESDL 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063 95/103 (92%)
CH_ACTN_rpt2 139..252 CDD:409065 93/112 (83%)
SPEC 302..525 CDD:238103 143/222 (64%)
SPEC 420..647 CDD:238103 136/226 (60%)
SPEC 538..760 CDD:238103 130/221 (59%)
EFh 775..842 CDD:238008 35/66 (53%)
EFhand_Ca_insen 847..913 CDD:400872 45/65 (69%)
actn3aNP_571597.1 CH 41..139 CDD:278723 89/97 (92%)
CH 154..259 CDD:237981 86/104 (83%)
Spectrin 283..392 CDD:278843 71/108 (66%)
SPEC 404..631 CDD:238103 136/226 (60%)
Spectrin 639..742 CDD:278843 58/102 (57%)
FRQ1 752..896 CDD:227455 94/148 (64%)
EFh 759..821 CDD:238008 35/66 (53%)
EFhand_Ca_insen 826..892 CDD:285885 45/65 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I3028
eggNOG 1 0.900 - - E2759_KOG0035
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H862
Inparanoid 1 1.050 1295 1.000 Inparanoid score I156
OMA 1 1.010 - - QHG54323
OrthoDB 1 1.010 - - D543832at2759
OrthoFinder 1 1.000 - - FOG0000815
OrthoInspector 1 1.000 - - otm24529
orthoMCL 1 0.900 - - OOG6_101135
Panther 1 1.100 - - O PTHR11915
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X512
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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