DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actn and sptbn5

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_021323109.1 Gene:sptbn5 / 569585 ZFINID:ZDB-GENE-131121-26 Length:4138 Species:Danio rerio


Alignment Length:1020 Identity:282/1020 - (27%)
Similarity:458/1020 - (44%) Gaps:210/1020 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MENGLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDFRNGLK 67
            ||..:..|..||...:.:| :|..:        ||||:|.|.||...|:|..:.::..:.|.|:.
Zfish     1 MEKRVDGEESDGRFRELQE-QRMTV--------QKKTYTKWMNSVFSKSGVVLTDVFTELRTGVH 56

  Fly    68 LMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIWT 132
            |:.|||:||||.||.|.|..:|.|.:.|.:.|:.|:.|| :.:..||.|.:|||:..:.||:||.
Zfish    57 LVRLLELISGEKLPTPSRRTLRVHCLENNSIAITFLKSK-IRVDLIGPENVVDGDRTLILGLIWI 120

  Fly   133 IILRFAIQDISVEE---------MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHR 188
            |||||.|.:|::.|         .:|||.||:|||||||.|.|||||:|..|::|||||.||||.
Zfish   121 IILRFQIGNINIVEAGGDASAARRSAKEALLIWCQRKTAGYTNVNVQDFSGSWRDGLAFNALIHA 185

  Fly   189 HRPDLIDYAKLSKDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQ 253
            |||||.||.:|.:|:|..:|..||.:||....|.::||.:|:: .|.|||::||||||.|||.|.
Zfish   186 HRPDLFDYNRLRQDDPKRSLTHAFALAEDEFGIMQLLDVEDVM-VPHPDEKSIMTYVSLYYHYFS 249

  Fly   254 GAQQVGNVTHVPEPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRT 318
            ..:|                      .:|...||.|::.:.:|.:.:...||.:.||||.||:..
Zfish   250 KMKQ----------------------GQTIQKRIAKIVDLLKELDDMKGLYESMVSDLLRWIKTK 292

  Fly   319 MPWLNSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEG 383
            :..||.|...|||..:|..:..::.||...|||:.:::..:|.:...|:||||.:|:..|:|.||
Zfish   293 VVELNDRSFPNSLREMQHLVAAFKKYRTIEKPPKYQERGAIEAHLFDLRTKLRANNQRDYIPPEG 357

  Fly   384 KTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFR 448
            ||:.||..:|..||.||...|..|.:..||||:||.|||||..||...|.:.....:::|.||..
Zfish   358 KTLGDIERNWTLLERAEHQRERVLQSALMRLEQLEQLAQKFGRKATLRESYLEDTLQLIQQQDLG 422

  Fly   449 QC-KLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLG 512
            .. :|.|.:...::.||..:|:.||:.|...::.:|..:....||..|.|..|...|.::|..|.
Zfish   423 GLQRLEEAEIAARRLEALGADVLAHEPRFRALSEMAAVIERDNYHSKVQVIRRNVDIMNRWKDLK 487

  Fly   513 ALTQRRRTALDEAER---ILEKIDILHLEFAKRAAPFNNWLDG----------TREDLVDMFIVH 564
            .:.|.:|..:.:|..   :|..|:::.::..:..|..::...|          .::||:|..|:.
Zfish   488 QVLQEQRAHVGDAANTFAVLRDIELISMDLKELQAQADSSDMGKQLPDVVALLQKQDLIDTQIIS 552

  Fly   565 TMEEIQGLIQAH---------DQFKATLGEADKEFNLIVNLVRE----VESIVKQ-------HQI 609
            ..|.:..:..:.         .:.:..|.:.:..:|.::.|.:.    :|..:|.       .::
Zfish   553 LGETLNAISSSSALKVKHKGATKVQRELKDLNSHYNSLLGLSKNRRKALEGQLKLFEFFHDCEEV 617

  Fly   610 PGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTLANELRKQQN------------------NE-- 654
            ...:...:..|.|..:.|..|.::|.: |..:.|..|::.|::                  ||  
Zfish   618 EAWIYEKWVLLQAASLGRDLSQIQQAI-QNHKALEAEIQSQESLCSGVVFRGQELCRGRHPNEND 681

  Fly   655 -------------------MLRRQFAEKANIV----------GPW-------------------- 670
                               .:|:.....||::          ..|                    
Zfish   682 IQKWIRTLQKQWQQLKEQVTIRKNRLHAANVIKQYFADITEASSWLDDHKPLLIDEDYGKDEASS 746

  Fly   671 ---------IERQMDA----VTAIGMGLQG-------SLEDQLHRLKEYEQAVYAYKPNIEELEK 715
                     :|::|:|    |..:|...:.       :.|.|..|:..|..:........::.:|
Zfish   747 TALLQRHQRVEKEMEAYSSEVKRLGEQAKSAAQLAPLTTETQQTRMVHYSDSSDGEDEKEKKADK 811

  Fly   716 IHQAVQESMIFENRYTNYTMETLRVGWE--QLLTSINRNINEVENQILTRDSKG----------- 767
            ..:||.:.:..|.....:.....::.|:  ::||.|:|   |.::::|.|||:|           
Zfish   812 GGKAVSKILQQEQAMIRFKYRGPKLIWDRGEILTIISR---EKDDKLLLRDSRGNEQLVSSTYIR 873

  Fly   768 ---ISQEQLNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRILAVVDPNNT 829
               :|||...|..:......|.:..|  |...:|.           |:|..:.. ...:.||   
Zfish   874 ELPVSQEAPPETTNGVAESPKRKVSR--PRRTRSM-----------RRGTAEIS-TSTLPDP--- 921

  Fly   830 GYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILPDELR 874
               ||..    .|.|||. ::.|:..:....||..|..||.|..|
Zfish   922 ---HFQK----DTIESTQ-NSLEKDFNRLYNLAQSKNKILEDTAR 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063 42/103 (41%)
CH_ACTN_rpt2 139..252 CDD:409065 64/121 (53%)
SPEC 302..525 CDD:238103 78/223 (35%)
SPEC 420..647 CDD:238103 52/260 (20%)
SPEC 538..760 CDD:238103 46/342 (13%)
EFh 775..842 CDD:238008 11/66 (17%)
EFhand_Ca_insen 847..913 CDD:400872 8/28 (29%)
sptbn5XP_021323109.1 SAC6 24..>387 CDD:227401 159/394 (40%)
SPEC 394..605 CDD:238103 44/210 (21%)
SPEC 606..>776 CDD:238103 21/170 (12%)
SPEC 958..1167 CDD:238103 1/1 (100%)
SPEC 1066..1272 CDD:238103
SPEC 1275..1484 CDD:238103
SPEC 1381..1588 CDD:238103
SPEC 1591..1799 CDD:238103
SPEC 1800..2010 CDD:238103
SPEC 2014..2222 CDD:238103
SPEC 2120..2331 CDD:238103
SPEC 2230..2443 CDD:238103
SPEC 2444..2655 CDD:238103
SPEC 2656..2866 CDD:238103
SPEC 2870..2969 CDD:197544
SPEC 2973..3184 CDD:238103
SPEC 3189..3390 CDD:238103
SPEC 3394..>3559 CDD:238103
Atrophin-1 <3557..3901 CDD:331285
PH-like 3919..4019 CDD:327399
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D543832at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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