DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and si:ch211-195o20.7

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_009291345.1 Gene:si:ch211-195o20.7 / 564006 ZFINID:ZDB-GENE-131127-614 Length:484 Species:Danio rerio


Alignment Length:197 Identity:53/197 - (26%)
Similarity:85/197 - (43%) Gaps:27/197 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VISGE-------TLPKPDRGKMRFHKIANVNKALDFIASKGVH--LVSIGAEEIVDGNLKMTLGM 129
            |::|.       |:....:.|.....:...|...:.|..|.|.  |...|...::|...|::   
Zfish   297 VVNGSSQPSITTTIESTPQSKTPAGSLDQQNNMTNSIKDKKVENSLPQTGTSSVLDVTNKVS--- 358

  Fly   130 IWTIILRFAIQD--------ISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALI 186
                  |..:|:        :.:...:.:..||.|||.:|..|||:.:.||...:.|||||||:.
Zfish   359 ------RMRMQEDFPSGLRSLRLHGGSRRNSLLRWCQCRTQGYKNIEITNFSSCWVDGLAFCAIY 417

  Fly   187 HRHRPDLIDYAKLSKDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHA 251
            |.:.|..|.|.:||.:|..|||..||...|.: .|...|..::::....||...::.||...|..
Zfish   418 HSYLPSHIPYNRLSPENKKENLTLAFQTGEGF-GISTSLTVEEMLKDDAPDWHRVLEYVESIYRH 481

  Fly   252 FQ 253
            |:
Zfish   482 FE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063 12/69 (17%)
CH_ACTN_rpt2 139..252 CDD:409065 39/120 (33%)
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
si:ch211-195o20.7XP_009291345.1 YhaN 114..>250 CDD:443752
CH_CYTS 373..483 CDD:409048 38/110 (35%)
Blue background indicates that the domain is not in the aligned region.

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