Protein Alignment Actn and smtnl1

DIOPT Version :10

• Sequence 1: NP_477485.1
• Gene: Actn / 31166
• FlyBaseID: FBgn0000667
• Length: 917
• Species: Drosophila melanogaster
• Sequence 2: NP_001013339.1
• Gene: smtnl1 / 503743
• ZFINID: ZDB-GENE-050306-23
• Length: 401
• Species: Danio rerio
• Alignment Length: 322
• Identity: 76/322 - (23%)
• Similarity: 118/322 - (36%)
• Gaps: 80/322 - (24%)

  Fly    13 DGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDFR-------NGLKLML 70
            :|..|:::|.:|....:...||::.:..|...:..::|      ..|...|       :.|:...
Zfish   119 EGQFEEKQEEKRTKETECKTEKKEDEKDTKQSSDEVKK------KTENPGRKNAAASSSALRAST 177

  Fly    71 LLEVISGETLPKPDRGKM-RFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTII 134
            ...|.|....|...|..| :|.|                       ||        |.|     :
Zfish   178 KSSVSSRSARPSARRDAMAKFQK-----------------------EE--------TPG-----V 206

  Fly   135 LRFAIQDISV---EEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDY 196
            ..|.:|..||   ...:.|:.:|.||:.||..|:.|::.||..|:.||||||||:||..|...|:
Zfish   207 RNFKVQRTSVGIAGGASIKQRILNWCKSKTQKYEGVSIDNFSSSWSDGLAFCALVHRFFPSAFDF 271

  Fly   197 AKLSKDNPLENLNTAFDVAEKYLDIPRMLDPDDLINTPK-PDERAIMTYVSCYYHAF-------- 252
            :.|......:|...||..||...|...:|:..|::...| ||...:.|||....|..
Zfish   272 STLKASEREKNFTLAFSTAETLADCCPLLEVSDMLLMGKNPDPLCVFTYVQALCHHLSKIEKERR 336

  Fly   253 ------------QGAQQVGNVTHVPEPTRQYTYVPNNYNAE-TAANRICKVLKVNQENERLM 301
                        :|..:|..........|:     .|.||| |..:...|..:...:||.::
Zfish   337 EKESLEKDKGKDEGVSEVNEKGDGEREERE-----QNENAEQTGTDSAMKTEQETDQNENVI 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Actn	NP_477485.1	CH_ACTN_rpt1	31..135	CDD:409063	18/111 (16%)
		CH_ACTN_rpt2	139..252	CDD:409065	42/116 (36%)
		SPEC	302..525	CDD:238103	76/322 (24%)
		SPEC	420..647	CDD:238103
		SPEC	538..760	CDD:238103
		EFh	775..842	CDD:238008
		EFhand_Ca_insen	847..913	CDD:430177
smtnl1	NP_001013339.1	CH_SMTN-like	223..329	CDD:409049	39/105 (37%)