DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and CG5984

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster


Alignment Length:214 Identity:41/214 - (19%)
Similarity:72/214 - (33%) Gaps:79/214 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RNGLK--LMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSI------------ 113
            |||:|  ..:.:|..||:.: :|.|.:....:...::..||  |..|::.|.|            
  Fly    92 RNGVKGNFEVRVEGPSGQPI-QPVRQQQLDPERFQIDCQLD--AGAGLYKVHIKCNSVTLPRSPF 153

  Fly   114 ------GAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNF 172
                  ||.|.:||              :.|...:.:.:..|.                 .||:.
  Fly   154 IIVAIAGATESIDG--------------KPASSSVPISDSDAS-----------------RVQSR 187

  Fly   173 HLSFKDGLAFCALIHRHR---------PDLIDYAKLSKDNPLENLNTAFDVAEKYLD------IP 222
            .|    ||...:|:.|:.         .:::....|.:..|.|      :|..::|.      ..
  Fly   188 GL----GLTHVSLVERNEFTVDCGQAGSNMLLVGVLGQRGPCE------EVVVRHLGRGIHRVTY 242

  Fly   223 RMLDPDDLINTPKPDERAI 241
            |:.||.|.|...|..|:.:
  Fly   243 RVCDPGDYILVVKWGEQHV 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063 20/91 (22%)
CH_ACTN_rpt2 139..252 CDD:409065 20/118 (17%)
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
CG5984NP_651548.1 Filamin 65..154 CDD:395505 15/64 (23%)
IG_FLMN 181..271 CDD:214720 20/108 (19%)
Blue background indicates that the domain is not in the aligned region.

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