Sequence 1: | NP_001259165.1 | Gene: | Actn / 31166 | FlyBaseID: | FBgn0000667 | Length: | 917 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006240306.1 | Gene: | Sptb / 314251 | RGDID: | 1303243 | Length: | 2329 | Species: | Rattus norvegicus |
Alignment Length: | 838 | Identity: | 288/838 - (34%) |
---|---|---|---|
Similarity: | 433/838 - (51%) | Gaps: | 125/838 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 WEREGLLDPAWEKQ--QKKTFTAWCNSHLRKAGTAIDNIEEDFRNGLKLMLLLEVISGETLPKPD 84
Fly 85 RGKMRFHKIANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISV----- 144
Fly 145 -EEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENL 208
Fly 209 NTAFDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQVGNVTHVPEPTRQYTY 273
Fly 274 VPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWLNSRQADNSLAGVQKKL 338
Fly 339 EEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEGKTVSDISNSWKGLELAEKAF 403
Fly 404 EEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKKHEAFESD 468
Fly 469 LAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLGALTQRRRTALDEAERILEKI- 532
Fly 533 -DILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQFKATLG-EADKEFNLIVN 595
Fly 596 LVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTLANELRKQQNNEMLRRQF 660
Fly 661 AEKANIVGPWIERQMDAVTAIGMG--------LQ---GSLEDQLHRLKEYEQAVYAYKPNIEELE 714
Fly 715 KIHQAVQESMIFENRYTNYTMET----LRVGWE---QLLTSINRNINEVEN-------------- 758
Fly 759 -----QILTRDSKGISQ--------------EQLNEFRSSFNHFDKNRTGRLSPEEFK 797 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Actn | NP_001259165.1 | CH_ACTN_rpt1 | 31..135 | CDD:409063 | 54/105 (51%) |
CH_ACTN_rpt2 | 139..252 | CDD:409065 | 68/118 (58%) | ||
SPEC | 302..525 | CDD:238103 | 95/222 (43%) | ||
SPEC | 420..647 | CDD:238103 | 64/229 (28%) | ||
SPEC | 538..760 | CDD:238103 | 40/259 (15%) | ||
EFh | 775..842 | CDD:238008 | 8/23 (35%) | ||
EFhand_Ca_insen | 847..913 | CDD:400872 | |||
Sptb | XP_006240306.1 | CH_SPTB-like_rpt1 | 40..156 | CDD:409095 | 57/115 (50%) |
CH_SPTB_rpt2 | 170..281 | CDD:409168 | 64/111 (58%) | ||
Spectrin | 302..411 | CDD:395348 | 49/108 (45%) | ||
Spectrin | 422..526 | CDD:395348 | 40/105 (38%) | ||
SPEC | 530..742 | CDD:238103 | 43/247 (17%) | ||
SPEC | 641..848 | CDD:238103 | 34/191 (18%) | ||
SPEC | 745..954 | CDD:238103 | 12/72 (17%) | ||
SPEC | 962..1168 | CDD:238103 | |||
SPEC | 1170..1379 | CDD:238103 | |||
SPEC | 1385..1475 | CDD:197544 | |||
SPEC | 1485..1690 | CDD:238103 | |||
SPEC | 1691..1901 | CDD:238103 | |||
SPEC | 1798..2005 | CDD:238103 | |||
SPEC | 2013..>2086 | CDD:197544 | |||
PH_beta_spectrin | 2182..2287 | CDD:269975 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D543832at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |