DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and Micall1

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_036015335.1 Gene:Micall1 / 27008 MGIID:105870 Length:887 Species:Mus musculus


Alignment Length:123 Identity:59/123 - (47%)
Similarity:81/123 - (65%) Gaps:7/123 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 LLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTAFDVAEK 217
            ||.||:|:...|:.|::::...||:|||||||::|||||||:|:..|||:|..||...||:||||
Mouse     8 LLAWCRRQCEGYRGVDIRDLSSSFRDGLAFCAILHRHRPDLLDFQSLSKENVFENNRLAFEVAEK 72

  Fly   218 YLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQV-------GNVTHVPEPT 268
            .|.||.:|||:|:::...||..:||||||.||:.|..:.|.       |.....|.||
Mouse    73 ELGIPALLDPNDMVSMSVPDCLSIMTYVSQYYNHFTSSGQAAASPPKPGKDPAPPSPT 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 53/98 (54%)
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
Micall1XP_036015335.1 CH_MICALL1 4..110 CDD:409101 54/101 (53%)
LIM_Mical_like_1 165..219 CDD:188828
PHA03247 <287..686 CDD:223021
bMERB_dom 711..832 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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