DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and Spta1

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_035595.2 Gene:Spta1 / 20739 MGIID:98385 Length:2415 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
Spta1NP_035595.2 Spectrin 1. /evidence=ECO:0000255 52..152
SPEC 53..261 CDD:238103
Spectrin 2. /evidence=ECO:0000255 157..259
SPEC 263..474 CDD:238103
Spectrin 3. /evidence=ECO:0000255 263..365
Spectrin 4. /evidence=ECO:0000255 370..471
SPEC 475..685 CDD:238103
Spectrin 5. /evidence=ECO:0000255 475..576
Spectrin 6. /evidence=ECO:0000255 580..681
Spectrin 685..783 CDD:278843
Spectrin 7. /evidence=ECO:0000255 686..787
Spectrin 8. /evidence=ECO:0000255 792..894
SPEC 794..977 CDD:238103
Spectrin 9. /evidence=ECO:0000255 898..967
SH3 980..1031 CDD:302595
Spectrin 1080..1177 CDD:278843
Spectrin 10. /evidence=ECO:0000255 1085..1177
Spectrin 11. /evidence=ECO:0000255 1183..1285
SPEC 1184..1393 CDD:238103
Spectrin 12. /evidence=ECO:0000255 1287..1390
SPEC 1394..1604 CDD:238103
Spectrin 13. /evidence=ECO:0000255 1394..1489
Spectrin 14. /evidence=ECO:0000255 1499..1603
SPEC 1606..1817 CDD:238103
Spectrin 15. /evidence=ECO:0000255 1606..1709
Spectrin 16. /evidence=ECO:0000255 1712..1815
SPEC 1713..1924 CDD:238103
Spectrin 17. /evidence=ECO:0000255 1818..1921
Spectrin 18. /evidence=ECO:0000255 1924..2029
SPEC 1926..2144 CDD:238103
SPEC 2040..2256 CDD:238103
Spectrin 19. /evidence=ECO:0000255 2040..2142
Spectrin 20. /evidence=ECO:0000255 2154..2254
EFh 2271..2339 CDD:298682
EFhand_Ca_insen 2346..2414 CDD:285885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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