DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and ehbp-1

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_505468.1 Gene:ehbp-1 / 179343 WormBaseID:WBGene00009098 Length:901 Species:Caenorhabditis elegans


Alignment Length:628 Identity:126/628 - (20%)
Similarity:213/628 - (33%) Gaps:198/628 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLI-DYAKLSKDNPLENLNTAFDV 214
            |.||.||||.|..|.:|.|.:|..|:.:|||.||::|.:||||| ||         |.|:.:.::
 Worm   335 ETLLSWCQRVTNGYSHVKVNDFMKSWNNGLALCAVLHSYRPDLIGDY---------ETLDISNNM 390

  Fly   215 AEKYLDIPRMLDPDDLINTPK---------PDERAIMTYVSCYYHAFQGAQQ------------- 257
            :.:..:|.|.||...||...:         ||.:.|...:......|:|..:             
 Worm   391 SGRISNIQRALDSLTLIGITEVPTVDMFLTPDRKQIEFLLQHLRRIFEGFDEGSTPASASDHRIS 455

  Fly   258 ------------VGNVTHVP-----EPTRQYTYVPNNY----------------------NAETA 283
                        |..:|.:.     |....|.::|:..                      :|||:
 Worm   456 RTFGINESEEKVVAMITEIRNQKDLEEAVDYRHIPDEVPVTPQLASRNPALNQPTDADDDDAETS 520

  Fly   284 ANR--------------ICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWL--NSRQADNSLA 332
            ..|              :..:...|:.:....:|..:.|.||:|  :.|.|..  |||:|.:.  
 Worm   521 NMRFERSNVSITMVTPGVGAIRASNRASPSKRDELRQRARDLIE--KSTTPAATPNSRKASDE-- 581

  Fly   333 GVQKKLEEYRTYRRKHKPP-------------------------RVE---QKAKLETNFNTLQTK 369
              :::.||.|....:.:.|                         |:|   .|.|......||..|
 Worm   582 --ERRREEVRRMLNEKQHPTAIPSTSSSPYPTFRRIDGSNTDLRRIELDVHKFKKRDPSPTLVRK 644

  Fly   370 LRLSNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDW 434
            ....|...::|..|:..::.:.:......:...|:......:||...|:...|            
 Worm   645 QYDPNDTPHVPAIGRGRTNGNRNDSSTPSSASTFDRVKRYGSMRSAELKESLQ------------ 697

  Fly   435 TRGKEEMLQSQDFRQCKLNELKALKKKHEA-FESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVN 498
            ...|:......||.....:.|....||..: :|.|       |:.:...|.||        |.::
 Worm   698 LMAKQYGYMGNDFESSSQDALATPTKKFSSQWEKD-------VDDVEGTANEL--------VRID 747

  Fly   499 ARCQRICDQWDRLGALTQRRRTALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIV 563
            .|...|..|.|.:  ..:.|.|.:..:|.  |.:...:||           |...|..||     
 Worm   748 ERISDITAQADVI--QDKIRETEVGSSEE--EMLTASYLE-----------LTNERNTLV----- 792

  Fly   564 HTMEEIQGLIQAHDQFKATLGEADKEFNLIVNLVREVESIVKQ-----HQIPGGLENPYTTLTAN 623
                        |.|          |:..|:..:|:|.|.:.|     :::|..........||.
 Worm   793 ------------HRQ----------EYYNIIETIRQVTSEIDQLGKQINEVPDDFPRSDENKTAT 835

  Fly   624 D-MTRKWSDVRQLVPQRDQTL-ANELRKQQNNEMLRRQFAEKA 664
            | :..::||..:......|.| |.|...:::::.|:....::|
 Worm   836 DKLIEQYSDAMKTKSNLVQKLFATEDEIEEDSDRLKNLTLDRA 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 37/110 (34%)
SPEC 302..525 CDD:238103 49/253 (19%)
SPEC 420..647 CDD:238103 45/234 (19%)
SPEC 538..760 CDD:238103 25/134 (19%)
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
ehbp-1NP_505468.1 NT-C2 12..166 CDD:287345
CH 335..437 CDD:237981 37/110 (34%)
DUF3585 737..866 CDD:288945 36/178 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0035
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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