DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and Ehbp1l1

DIOPT Version :10

Sequence 1:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_030106561.1 Gene:Ehbp1l1 / 114601 MGIID:3612340 Length:1730 Species:Mus musculus


Alignment Length:517 Identity:114/517 - (22%)
Similarity:188/517 - (36%) Gaps:167/517 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTA 211
            :::.:.||.|||..|..|:.|.:.||..|:::||||||::||..||.|||..|...|..:|...|
Mouse  1222 VSSSQSLLEWCQEVTNGYRGVCITNFTTSWRNGLAFCAILHRFYPDKIDYFSLDPLNIKQNNKQA 1286

  Fly   212 FDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAF----------------QGAQQVGN 260
            || ....|.:.|:|:|.|::....||:..:|||: |...||                .|..:|||
Mouse  1287 FD-GFAALGVSRLLEPADMVLLSVPDKLIVMTYL-CQIRAFCTGQELQLVQLEGGGGSGTYRVGN 1349

  Fly   261 VTHVPEPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRR---TMPWL 322
            .    :|:     :|:..:|...|             :||.|....:.::..|.:.|   .:|.:
Mouse  1350 A----QPS-----LPDCLDAGDLA-------------QRLREHGAEVPTEPKEAVNRGTGAIPKV 1392

  Fly   323 NSRQADNS------------------------------------------------LAGVQKKLE 339
            .||..|.|                                                ::||:.:..
Mouse  1393 ASRDTDLSCSSKDGEAEVAQEAIPQEAPTDGPRARSSTTPVVPAEGLVNGVGASGGVSGVRLRRS 1457

  Fly   340 EYRTYRRKHKPPRVEQKAKLETNFNTL---QTKLRLSNR-------------------------- 375
            ..........|||.........:.:.|   :::||.||.                          
Mouse  1458 SVNGEAGPVPPPRAHGSFSHVRDADLLKKRRSRLRNSNSFSVDDQDSGAAVGAGPAGPGAVEGPN 1522

  Fly   376 ----------PAYLPTE---GKTVSDISNSWKGLELAEKAFE---EWLLAETMRLER-------- 416
                      ||..|.:   |...::.|:...|.|...:.|:   :::.||...||:        
Mouse  1523 PASSPDANPLPAPAPQQPPGGPPPTEESSPSLGEETGLQRFQDTSQYVCAELQALEQEQGQIDGR 1587

  Fly   417 -----------LEHLAQKFKHKADAHEDWT--RGKEEMLQSQDFRQCKLNELKALKKKHEAFESD 468
                       :|..|.:.:.:....|.:|  ..|..:::.||..|..:.| :.|:::.|....:
Mouse  1588 AAEVEKQLRSLMESGANRLQEEVLIQEWFTLVNKKNALIRRQDQLQLLIEE-QDLERRFELLSRE 1651

  Fly   469 LAAHQDRVEQIAAIAQE-LNTLEYHDCVS-VNARCQRICDQWDRLGALTQRRRTALDEAERI 528
            |.|.....|....:||: ...|...:.|| ||.|.:.:.|       |.|:.|.||:|.||:
Mouse  1652 LRAMLAIEEWQKTVAQQHREQLLLEELVSLVNQRDELVRD-------LDQKERIALEEDERL 1706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 41/104 (39%)
SPEC 302..525 CDD:238103 58/341 (17%)
SPEC 420..647 CDD:238103 30/113 (27%)
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
Ehbp1l1XP_030106561.1 NT-C2 12..164 CDD:463058
PHA03307 185..>538 CDD:223039
CH_EHBP1L1 1223..1327 CDD:409104 43/105 (41%)
bMERB_dom 1573..1706 CDD:463467 33/140 (24%)
Blue background indicates that the domain is not in the aligned region.

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