DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and Ehbp1l1

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_030106561.1 Gene:Ehbp1l1 / 114601 MGIID:3612340 Length:1730 Species:Mus musculus


Alignment Length:517 Identity:114/517 - (22%)
Similarity:188/517 - (36%) Gaps:167/517 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTA 211
            :::.:.||.|||..|..|:.|.:.||..|:::||||||::||..||.|||..|...|..:|...|
Mouse  1222 VSSSQSLLEWCQEVTNGYRGVCITNFTTSWRNGLAFCAILHRFYPDKIDYFSLDPLNIKQNNKQA 1286

  Fly   212 FDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAF----------------QGAQQVGN 260
            || ....|.:.|:|:|.|::....||:..:|||: |...||                .|..:|||
Mouse  1287 FD-GFAALGVSRLLEPADMVLLSVPDKLIVMTYL-CQIRAFCTGQELQLVQLEGGGGSGTYRVGN 1349

  Fly   261 VTHVPEPTRQYTYVPNNYNAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRR---TMPWL 322
            .    :|:     :|:..:|...|             :||.|....:.::..|.:.|   .:|.:
Mouse  1350 A----QPS-----LPDCLDAGDLA-------------QRLREHGAEVPTEPKEAVNRGTGAIPKV 1392

  Fly   323 NSRQADNS------------------------------------------------LAGVQKKLE 339
            .||..|.|                                                ::||:.:..
Mouse  1393 ASRDTDLSCSSKDGEAEVAQEAIPQEAPTDGPRARSSTTPVVPAEGLVNGVGASGGVSGVRLRRS 1457

  Fly   340 EYRTYRRKHKPPRVEQKAKLETNFNTL---QTKLRLSNR-------------------------- 375
            ..........|||.........:.:.|   :::||.||.                          
Mouse  1458 SVNGEAGPVPPPRAHGSFSHVRDADLLKKRRSRLRNSNSFSVDDQDSGAAVGAGPAGPGAVEGPN 1522

  Fly   376 ----------PAYLPTE---GKTVSDISNSWKGLELAEKAFE---EWLLAETMRLER-------- 416
                      ||..|.:   |...::.|:...|.|...:.|:   :::.||...||:        
Mouse  1523 PASSPDANPLPAPAPQQPPGGPPPTEESSPSLGEETGLQRFQDTSQYVCAELQALEQEQGQIDGR 1587

  Fly   417 -----------LEHLAQKFKHKADAHEDWT--RGKEEMLQSQDFRQCKLNELKALKKKHEAFESD 468
                       :|..|.:.:.:....|.:|  ..|..:::.||..|..:.| :.|:::.|....:
Mouse  1588 AAEVEKQLRSLMESGANRLQEEVLIQEWFTLVNKKNALIRRQDQLQLLIEE-QDLERRFELLSRE 1651

  Fly   469 LAAHQDRVEQIAAIAQE-LNTLEYHDCVS-VNARCQRICDQWDRLGALTQRRRTALDEAERI 528
            |.|.....|....:||: ...|...:.|| ||.|.:.:.|       |.|:.|.||:|.||:
Mouse  1652 LRAMLAIEEWQKTVAQQHREQLLLEELVSLVNQRDELVRD-------LDQKERIALEEDERL 1706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 41/104 (39%)
SPEC 302..525 CDD:238103 58/341 (17%)
SPEC 420..647 CDD:238103 30/113 (27%)
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
Ehbp1l1XP_030106561.1 NT-C2 12..164 CDD:371003
PHA03307 185..>538 CDD:223039
CH 1223..1322 CDD:366016 41/100 (41%)
DUF3585 1570..1706 CDD:371910 34/143 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0035
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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