DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and ehbp1l1

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_031756560.1 Gene:ehbp1l1 / 100489353 XenbaseID:XB-GENE-6461189 Length:2062 Species:Xenopus tropicalis


Alignment Length:605 Identity:129/605 - (21%)
Similarity:238/605 - (39%) Gaps:160/605 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 TAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTAF 212
            ::.:.||.|||..|..|:.|.|.||..|:::||||||::|...|:.|:|..|...|..||...||
 Frog  1523 SSTDTLLHWCQEVTGGYRGVRVNNFTTSWRNGLAFCAILHHFHPEFINYDVLDPLNIKENNKKAF 1587

  Fly   213 DVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYY--HAFQGAQQVGNV-------------- 261
            | ....|.||.:|.|.|::..|.||:..|:||: |..  |.....::|.:.              
 Frog  1588 D-GFAGLGIPALLCPTDMLLRPIPDKLIILTYL-CQIRDHFISQKREVTDTQVTEAEFFSSKEKS 1650

  Fly   262 --------THVPEPTRQYTYVPNNYNAETA---ANRICKVLKVNQENERLMEEYERLASDLLE-- 313
                    |.:.:.|...:..|.:.||..:   ...|.|..||.::.:..::..:::....||  
 Frog  1651 MASTTTEETKIQKSTVAKSISPEDLNANISPGLKKLITKSPKVEKQEKSSLDREDKVNVSTLEEK 1715

  Fly   314 ------WIRRTMPWLNSRQADNSLAGVQKKLE---------EYRTYRR---KHK----------- 349
                  :..:.||.....:...|.....|..|         |::|..:   ||:           
 Frog  1716 EKQRFSFTEQKMPGSGKDKQGPSSGDKSKPKETSQDLTINDEHKTANQTSPKHEAQSSSTNDAVI 1780

  Fly   350 -PPRVEQKAKL-------ETNFNTLQTKLRLSNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEW 406
             |||::::..:       ::|...:...:..|:.|...|.:|..:..:.::    :|.:|...  
 Frog  1781 PPPRIKKRLSVNGGSNECDSNLEQVDASVSSSSTPVPPPRKGGGLGHLRDA----DLVKKRRS-- 1839

  Fly   407 LLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEML-------------QSQDFRQCKL--NELK 456
             |..|..|.....:.||      :||..:|...|::             .|....:.|:  .|..
 Frog  1840 -LIRTQSLSEEVDITQK------SHETDSRPSSEIINETPPSMHTTSVPSSVPTTEVKVKEEETP 1897

  Fly   457 ALKKKHEAFESDLAA---HQDRVEQIAAIAQ-ELNTLEYHDCVSVNARCQRICDQW----DRLGA 513
            :|:...:...|:|||   .|..|::.|::.: :|.:|..:.  |.....:.:..:|    :|..|
 Frog  1898 SLRDTSQYVTSELAALELEQRNVDERASVVEKDLRSLMENG--SDKEAEETLIQEWFSLVNRRNA 1960

  Fly   514 LTQRRRTALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQ 578
            |.:|:    ||.:.::|:.|:                 ..|.:|:.       .:::||:...:.
 Frog  1961 LIRRQ----DELQLLVEEQDL-----------------ERRFELLS-------RDLRGLLCIEEF 1997

  Fly   579 FKATLGEADKEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTL 643
            .|:   ||.|:...:  |:.|:.|:|.|..   ||                  ||.|..:..:..
 Frog  1998 MKS---EAQKKREKL--LLDELVSLVNQRD---GL------------------VRDLHFKGIRAF 2036

  Fly   644 ANELRKQQNNEMLRRQFAEK 663
            ..:.|.:::.|..||:.::|
 Frog  2037 EEDERIERSLEQRRRKLSKK 2056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 43/105 (41%)
SPEC 302..525 CDD:238103 50/284 (18%)
SPEC 420..647 CDD:238103 47/249 (19%)
SPEC 538..760 CDD:238103 23/126 (18%)
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
ehbp1l1XP_031756560.1 NT-C2 12..164 CDD:402120
PTZ00121 <288..700 CDD:173412
SMC_N <539..1390 CDD:308206
CH_EHBP1L1 1523..1627 CDD:409104 43/105 (41%)
DUF3585 1906..2037 CDD:403377 37/186 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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