DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Actn and ehbp1l1b

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_021327956.1 Gene:ehbp1l1b / 100331563 ZFINID:ZDB-GENE-091204-238 Length:2382 Species:Danio rerio


Alignment Length:528 Identity:121/528 - (22%)
Similarity:210/528 - (39%) Gaps:114/528 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTA 211
            :|:.:.||.|||..|..|:.|.:.||..|:::||||||::|...|::|::..|...|..:|..||
Zfish  1933 VTSTQSLLEWCQEITKKYRGVKITNFSTSWRNGLAFCAILHHFHPEIINFDSLEPHNIKQNNKTA 1997

  Fly   212 FDVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAFQGAQQVGNVTHVPEPTRQYTYV-- 274
            || ....|.|.|:|:|.|::....||...:|||:|.....|.|  |..:|..:.:...|.:|.  
Zfish  1998 FD-GFASLGISRLLEPSDMVLLSVPDRLIVMTYLSQIRTHFTG--QELSVLQIEQNNSQSSYTLA 2059

  Fly   275 -PNNYNAETAANRICKVLKVNQENERLM----------------EEYERLASDLLEWIRRTMPW- 321
             ||......||.:.|.        |||.                ||.|..::..|....||... 
Zfish  2060 GPNQRPDVQAATKFCV--------ERLQAGAFTGDNNSKDSIGEEESESKSNGGLVAPPRTKRTG 2116

  Fly   322 -LNSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEGKT 385
             ::..:.|   .|||..:          .|||: ..|.:.:....|:....:..|.:.:.:|...
Zfish  2117 KVDGEEID---GGVQTPV----------APPRL-NAAAVRSGLGHLRDADLVKKRRSRMKSESMD 2167

  Fly   386 VSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFRQC 450
            ..|........:.:|...|....:...| |..|...|      ||::|......|.:..||..|.
Zfish  2168 EPDSKEMLHESDKSEPTVEGTNGSAAAR-ENAEAEPQ------DANQDAKSADFETMCLQDTNQY 2225

  Fly   451 KLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQW----DRL 511
            .|:||:||:.:.:..:|..|..:.|:.::.....:.:..|            ::..:|    ::.
Zfish  2226 VLSELQALETEQKHIDSRAAVVEKRLRRLMESGSDKDEEE------------KLIQEWFTLVNKK 2278

  Fly   512 GALTQRR--RTALDEAERILEKIDILHLEFAKRAAPFNNW----LDGTREDLVDMFIVHTMEEIQ 570
            .||.:|:  ...|.|.:.:..:.::|:.|.....| ..:|    ....||.|:       ::|:.
Zfish  2279 NALIRRQDHLELLQEEQDLERRFELLNRELRAMMA-IEDWQKTQAQQHREQLL-------LQELV 2335

  Fly   571 GLIQAHDQFKATLGEADKEFNLIVNLVREVE-----SIVKQHQIPGGLENPYTTLTANDMTRKWS 630
            .|:...|:                 |||:::     ::.:..::..|||         ...||:|
Zfish  2336 SLVNKRDK-----------------LVRDMDAKERGALEEDERLERGLE---------ARRRKFS 2374

  Fly   631 DVRQLVPQ 638
            :..:.|.|
Zfish  2375 NKEKCVLQ 2382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 40/104 (38%)
SPEC 302..525 CDD:238103 45/230 (20%)
SPEC 420..647 CDD:238103 44/234 (19%)
SPEC 538..760 CDD:238103 20/110 (18%)
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
ehbp1l1bXP_021327956.1 NT-C2 12..165 CDD:313563
CH 1937..2037 CDD:306753 39/100 (39%)
DUF3585 2226..2362 CDD:314926 28/172 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0035
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.