DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and sptan1

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_031762662.1 Gene:sptan1 / 100036647 XenbaseID:XB-GENE-986854 Length:2497 Species:Xenopus tropicalis


Alignment Length:950 Identity:248/950 - (26%)
Similarity:437/950 - (46%) Gaps:153/950 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDFRNGLK--LMLLLEVISGETLPK 82
            ::|  :.|:..:.||.||          |::|     |.:::|..|:|  ...|.||.:  .|..
 Frog  1642 DQW--QFLVSKSAEKSQK----------LKEA-----NKQQNFNTGIKDFDFWLTEVEA--LLAS 1687

  Fly    83 PDRGKMRFHKIANVNKALDFIASKGVHLV--SIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE 145
            .|.||    .:|:||..|     |...|:  .|.|.|   ..||...|...:::...|.....|:
 Frog  1688 EDYGK----DLASVNNLL-----KKHQLLEADISAHE---DRLKDLNGQADSLMTSSAFDTTQVK 1740

  Fly   146 EMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNT 210
            |           :|.....:...:::...:.:..|.....:|:...||.|.....|:..|     
 Frog  1741 E-----------KRDAINDRFQRIKSMATARRSRLNESHRLHQFFRDLDDEESWIKEKKL----- 1789

  Fly   211 AFDVAEKYLDIPRMLDPDDL------INTPKPDERAIMTYVSCYYHAFQGAQQVGNVTHVPEPTR 269
                         ::..||.      :...:...:.:...::.:..|.||....|          
 Frog  1790 -------------LVGSDDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTG---------- 1831

  Fly   270 QYTYVPNNYNAETAANRICKVLKVNQE--------NERLME--EYERLASDLLE---WIRRTMPW 321
            :.....|....:....|:.:.|:..:|        .:||.|  ||::..:::.|   ||...|..
 Frog  1832 KKLADDNTIGKDEIQQRLAQFLEHWKELKEQAAARGQRLEESLEYQQFVANVEEEEAWINEKMTL 1896

  Fly   322 LNSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLR--LSNRPAYLPTEGK 384
            :.|....::||.:|..|:::..:               ||:|...:.::.  .:|....:.....
 Frog  1897 VASEDYGDTLAAIQGLLKKHEAF---------------ETDFTVHKDRVHDVCANGEDLIQKNNH 1946

  Fly   385 TVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQ--KFKHKADAHEDWTRGKEEMLQSQDF 447
            .|.:||...|||.......|:   |...|..:|:..:.  :|..|||..|.|...||..|::.|:
 Frog  1947 HVENISAKMKGLRGKVAELEK---AAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDY 2008

  Fly   448 RQCKLNELKALKKKHEAFESDLAA-HQDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRL 511
            .: .|:.::.|..|.|.|::.|.| .|:.:..|.|:..:|...::....::.:|...:..:|::|
 Frog  2009 GR-DLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSRAIESRHASLMKRWNQL 2072

  Fly   512 GALTQRRRTALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAH 576
            ...:..|:..|.||:....|::.|.|.|||:|:.||:|.:...|||.|....:::|||:.|.:||
 Frog  2073 LDNSAARKKKLLEAQEHYRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAH 2137

  Fly   577 DQFKATLGEADKEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQ 641
            |.|:.:|..|..:||.:..|.|:    :|.:::   ..||||..|...:...|.::::::.:|:.
 Frog  2138 DAFRNSLSSAQTDFNQLAELDRQ----IKGYRV---ASNPYTWFTMEALEETWRNLQKIIKEREL 2195

  Fly   642 TLANELRKQQNNEMLRRQFAEKANIVGPWIERQ----MDAVT----------AIGMGL------- 685
            .|..|.|:|:.|:.||::||:.||....||:..    :|.:.          .:|..|       
 Frog  2196 ELQKEQRRQEENDKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMV 2260

  Fly   686 --QGSLEDQLHRLKEYEQAVYAYKPNIEELEKIHQAVQESMIFENRYTNYTMETLRVGWEQLLTS 748
              .|:||.||...|...|.:.|.:..::::|.:..|::|::|.:|:||.::...|...|:||...
 Frog  2261 EESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQL 2325

  Fly   749 INRNINEVENQILTRDSKGISQEQLNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQG 813
            ..|..:.:|.||..|::.|:::|.|.||...|.||||:::|||:.:||||||.||||.:....:|
 Frog  2326 GMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEG 2390

  Fly   814 --DLDFQRILAVVDPNNTGYVHFDAFLDFM-TRESTDTDTAEQVIDSFRILAAD-KPYILPDELR 874
              |.:|:.||..||||..|:|....::.|| :||:.:..::|::..:||.|:.| |||:..:||.
 Frog  2391 EPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSTDQKPYVTKEELY 2455

  Fly   875 RELPPDQAEYCIQRMPPYKGPNG--VPGALDYMSFSTALY 912
            :.|..:||:|||..|.||....|  :|.|.||:.|:.:|:
 Frog  2456 QNLTREQADYCISHMKPYMDSKGRELPSAYDYVEFTRSLF 2495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063 29/107 (27%)
CH_ACTN_rpt2 139..252 CDD:409065 12/118 (10%)
SPEC 302..525 CDD:238103 52/232 (22%)
SPEC 420..647 CDD:238103 65/229 (28%)
SPEC 538..760 CDD:238103 70/244 (29%)
EFh 775..842 CDD:238008 33/69 (48%)
EFhand_Ca_insen 847..913 CDD:400872 26/68 (38%)
sptan1XP_031762662.1 Spectrin 44..147 CDD:395348
SPEC 150..361 CDD:238103
SPEC 362..572 CDD:238103
SPEC 468..678 CDD:238103
SPEC 679..890 CDD:238103
SPEC 891..1161 CDD:238103
SH3_Alpha_Spectrin 971..1023 CDD:212742
SPEC 1092..1338 CDD:238103
SPEC 1233..1444 CDD:238103
SPEC 1445..1662 CDD:238103 8/36 (22%)
Spectrin 1662..1766 CDD:395348 28/128 (22%)
SPEC 1769..1978 CDD:238103 44/254 (17%)
SPEC 1875..2086 CDD:238103 51/229 (22%)
SPEC 1982..2200 CDD:238103 65/225 (29%)
SPEC 2100..2337 CDD:238103 70/243 (29%)
EFh 2352..2420 CDD:238008 31/67 (46%)
EFhand_Ca_insen 2427..2495 CDD:400872 25/67 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D543832at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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