DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn and zgc:165653

DIOPT Version :9

Sequence 1:NP_001259165.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001093571.1 Gene:zgc:165653 / 100006671 ZFINID:ZDB-GENE-070620-24 Length:151 Species:Danio rerio


Alignment Length:120 Identity:94/120 - (78%)
Similarity:104/120 - (86%) Gaps:4/120 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MME---NGLSMEYG-DGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRKAGTAIDNIEEDF 62
            |||   |..:..|| :.||.||:||:|:.||||||||||:||||||||||||||||.|:||||||
Zfish     1 MMEMQYNNNNNGYGVEEYMIQEDEWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF 65

  Fly    63 RNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVHLVSIGAEE 117
            |||||||||||:||||.|.||||||||||||||||||||:|.||||.|||||||:
Zfish    66 RNGLKLMLLLELISGERLAKPDRGKMRFHKIANVNKALDYITSKGVKLVSIGAED 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActnNP_001259165.1 CH_ACTN_rpt1 31..135 CDD:409063 77/87 (89%)
CH_ACTN_rpt2 139..252 CDD:409065
SPEC 302..525 CDD:238103
SPEC 420..647 CDD:238103
SPEC 538..760 CDD:238103
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:400872
zgc:165653NP_001093571.1 CH 38..120 CDD:278723 72/81 (89%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D543832at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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