Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001116766.1 | Gene: | nr2c2 / 569321 | ZFINID: | ZDB-GENE-080403-8 | Length: | 623 | Species: | Danio rerio |
Alignment Length: | 624 | Identity: | 159/624 - (25%) |
---|---|---|---|
Similarity: | 248/624 - (39%) | Gaps: | 183/624 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 PDISQLNDSNNSSFSPKAESPVPFMQAMSMVHVLPGSNS---------ASSNNNSAGDAQMAQAP 76
Fly 77 NSAGG-------------------SAAAAVQQQYPPNHPLSGSKHL--CSICGDRASGKHYGVYS 120
Fly 121 CEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEE-------R 178
Fly 179 QRGARNAAGR--------------------------------------------------LSASG 193
Fly 194 GGSSGPGSVG-------------GSSSQGGGGGGGV-------------------------SGGM 220
Fly 221 GSGNGSDDFMTNSVSRDFSIERIIEAEQRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQVV 285
Fly 286 NKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS-IVSLDDGGAGGGGGGLGHD 349
Fly 350 GSFERRSPGLQPQQLFLNQSFSYHRNSAIK-------AGVSAIFDRI--LSELSVKMKRLNLDRR 405
Fly 406 ELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISL 470
Fly 471 KCQDHLFLFRITSDRPLEEL-----------FLEQLEAP 498 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 50/84 (60%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 68/252 (27%) | ||
nr2c2 | NP_001116766.1 | NR_DBD_TR2_like | 142..228 | CDD:143525 | 50/85 (59%) |
NR_LBD_TR2_like | 387..609 | CDD:132750 | 64/256 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170577467 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |