Protein Alignment usp and hnf4g

DIOPT Version :10

• Sequence 1: NP_476781.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: XP_021325864.1
• Gene: hnf4g / 557104
• ZFINID: ZDB-GENE-060929-100
• Length: 459
• Species: Danio rerio
• Alignment Length: 480
• Identity: 136/480 - (28%)
• Similarity: 215/480 - (44%)
• Gaps: 110/480 - (22%)

  Fly    34 FSPKAESPVP-FMQAMSMVHVLPGSNSASSN---NNS----AGDAQMAQAPNSAGGSAAAAVQQQ 90
            |||   :|:| .:..|.:.:...|.:...|.   .|:    .|: .|...||.:.|.
Zfish     3 FSP---TPLPKSLLDMDVANYCEGLDPTYSTLGFENAEVLYCGE-NMPTEPNISQGE-------- 55

  Fly    91 YPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNR 155
                   :|....|:||||:|:|||||..||:||||||:|::||...|:||.||.|::||.:||:
Zfish    56 -------NGVSSNCAICGDKATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFNRQCVVDKDKRNQ 113

  Fly   156 CQYCRYQKCLTCGMKREAVQEERQRGARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGM 220
            |::||..||...|||:||||.||.|                                       :
Zfish   114 CRFCRLHKCFRAGMKKEAVQNERDR---------------------------------------I 139

  Fly   221 GSGNGSDDFMTNSVSRDF-SIERIIEAEQRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQV 284
            .|.....|      |.|. .|..:..||..::.|....:    .:|| :.|.......:|.:|:.
Zfish   140 SSRRNIQD------SHDLPPITALAHAEALSQQQITAAS----PMGP-ADVSEKKSATISDVCES 193

  Fly   285 VNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSIVSLDDGGAGGGGGGLGHD 349
            :.:||..:||:|:.:|.|.::||||||.||:|...|.|:..||
Zfish   194 MKQQLLVLVEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVA---------------------- 236

  Fly   350 GSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAII 414
                :||...: ..|.|......|||.. :..:..:.:|:|.||.:..:.:.:|..|.:.||||:
Zfish   237 ----KRSMSYK-DLLLLGNGCVIHRNCP-EPEIGRVSNRVLDELVLPFQDIQIDDNEYAALKAIV 295

  Fly   415 LYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLF 479
            .::||.:.::..::|:..|.:|...|:::.........|||.:|||.||.|:||:.:..:.|...
Zfish   296 FFDPDAKSLRDPSKIKAMRYQVQMSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQLQFI 360

  Fly   480 RITS----DRPLEELFLEQLEAPPP 500
            ::..    |..|:|:.|..|....|
Zfish   361 KLFGLAKIDNLLQEMLLGGLTTEQP 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_476781.1	NR_DBD_RXR	102..178	CDD:143514	44/75 (59%)
		NR_LBD_RXR_like	237..480	CDD:132741	65/243 (27%)
hnf4g	XP_021325864.1	NR_DBD_HNF4A	62..137	CDD:143518	45/74 (61%)
		NR_LBD_HNF4_like	154..375	CDD:132729	66/253 (26%)