Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189151.1 | Gene: | Hr78 / 40378 | FlyBaseID: | FBgn0015239 | Length: | 601 | Species: | Drosophila melanogaster |
Alignment Length: | 629 | Identity: | 143/629 - (22%) |
---|---|---|---|
Similarity: | 210/629 - (33%) | Gaps: | 240/629 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 QAMSMVHVLPGSNSASSNNNSAGDAQMAQAPNSAGGSAAAAVQQQYPPNHPLSGSKHLCSICGDR 110
Fly 111 ASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQ 175
Fly 176 EE------RQRGARNAAGRLSASGGGSSGPGSVGGSS--SQGGGGGGGVSG-------------- 218
Fly 219 ---------GMG--------------------------SGNGS------------DDFMTNSVS- 235
Fly 236 ----------------------------------------------------------------- 235
Fly 236 ----------------------------------------RDFSI-ERIIEAEQRAETQCGDRAL 259
Fly 260 TFLRVGPYSTVQPDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIA 324
Fly 325 NVAWC----SIVSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAI 385
Fly 386 FDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEM----CREKVYACLDEHCRL 446
Fly 447 EHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEEL 490 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 48/81 (59%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 55/251 (22%) | ||
Hr78 | NP_001189151.1 | NR_DBD_TR2_like | 47..133 | CDD:143525 | 49/99 (49%) |
NR_LBD_TR2_like | 372..595 | CDD:132750 | 51/251 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45444771 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24083 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |