Protein Alignment usp and Eip75B

DIOPT Version :10

• Sequence 1: NP_476781.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_730321.1
• Gene: Eip75B / 39999
• FlyBaseID: FBgn0000568
• Length: 1412
• Species: Drosophila melanogaster
• Alignment Length: 529
• Identity: 135/529 - (25%)
• Similarity: 215/529 - (40%)
• Gaps: 137/529 - (25%)

  Fly    13 SHIKEEVKPDISQLNDSN---------------NSSFSPKAESPVPFMQAMSMVHVLPGS--NSA 60
            |||..  .|.:|..:.||               ||...|....|.|     .:.|....|  ||:
  Fly   369 SHIFR--TPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPPP-----KVKHASSSSSGNSS 426

  Fly    61 SSNNNSAGDAQMAQAPNSAGGSAAAAVQQQYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCK 125
            |||.|::..:...:.|:|:            .|:....|:..||.:|||:|||.||||:||||||
  Fly   427 SSNTNNSSSSSNGEEPSSS------------IPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCK 479

  Fly   126 GFFKRTVRKDLTY-ACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQ----EERQRGARNA 185
            |||:|::::.:.| .|.:|:.|.|.:..||||||||.:||:..||.|:||:    .:|::....|
  Fly   480 GFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 544

  Fly   186 AGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSR------DFSIERII 244
            |.:.|....|.                    ...:.:.......:..:|.|      :|:.|::.
  Fly   545 AMQQSTQNRGQ--------------------QRALATELDDQPRLLAAVLRAHLETCEFTKEKVS 589

  Fly   245 EAEQRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQVVNKQLFQ---------MVEYARMMP 300
            ...|||. .|...::..|...|.:...           ::.::|.|.         ::::|.|:|
  Fly   590 AMRQRAR-DCPSYSMPTLLACPLNPAP-----------ELQSEQEFSQRFAHVIRGVIDFAGMIP 642

  Fly   301 HFAQVPLDDQVILLKAAWIELLIANVAWC-------SIVSLDDGGAGGGGGGLGHDGSFERRSPG 358
            .|..:..||:..||||...:.|...:. |       ||:.|              :|...||
  Fly   643 GFQLLTQDDKFTLLKAGLFDALFVRLI-CMFDSSINSIICL--------------NGQVMRR--- 689

  Fly   359 LQPQQLFLNQSFSYHRNSAIKAGVSAIF--DRILSELSVKMKRLNLDRRELSCLKAIILYNPDIR 421
                             .||:.|.:|.|  |...: .:.:|..:||...|:....||:|..||..
  Fly   690 -----------------DAIQNGANARFLVDSTFN-FAERMNSMNLTDAEIGLFCAIVLITPDRP 736

  Fly   422 GIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRP 486
            |:::...||....::..||........|......|:||..:|.||::|....:.|.:||...
  Fly   737 GLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFRTEH--- 798

  Fly   487 LEELFLEQL 495
             :||..:|:
  Fly   799 -KELLRQQM 806

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_476781.1	NR_DBD_RXR	102..178	CDD:143514	42/80 (53%)
		NR_LBD_RXR_like	237..480	CDD:132741	57/260 (22%)
Eip75B	NP_730321.1	NR_DBD_REV_ERB	453..541	CDD:143540	44/87 (51%)
		NR_LBD_REV_ERB	609..796	CDD:132738	51/233 (22%)