Protein Alignment usp and Hr51

DIOPT Version :9

• Sequence 1: NP_001259168.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_611032.2
• Gene: Hr51 / 36702
• FlyBaseID: FBgn0034012
• Length: 582
• Species: Drosophila melanogaster
• Alignment Length: 606
• Identity: 164/606 - (27%)
• Similarity: 245/606 - (40%)
• Gaps: 166/606 - (27%)

  Fly    18 EVKPDISQLNDSNNSSFSP-----KAESPVPFMQAMSMVHVLPGSNSASSN---------NNSAG 68
            |.:|...:|:......::|     ..::|.|....::.....|..:.|:.|         |:||.
  Fly     9 ETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQPPPPHPAAPNVPNGRLLSWNHSAA 73

  Fly    69 DAQMAQAPNSAGGSAAAAVQQQYPPNH--PLSGSKH----------LCSICGDRASGKHYGVYSC 121
            .|..|.|..:|..|.          ||  ...||..          :|.:|||.:||||||:.:|
  Fly    74 AAAAAAAAQAAANSM----------NHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILAC 128

  Fly   122 EGCKGFFKRTVRKDLTYACRENR-NCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQ------ 179
            .||.|||||:||:.|.|.|:... .|::||..||:||.||.:|||..||.::|||.|||
  Fly   129 NGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTAT 193

  Fly   180 ------------RGARNAAGRLS-----------ASGGGSSGPGSVGG-------------SSSQ 208
                        |..|.||..:.           ..|.|...|.|:|.             ||.|
  Fly   194 IRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTSSMQ 258

  Fly   209 ------GGG-----GGGGV-------SGGM---GSGNGSDDFMTNSVSRDFSIERIIEAEQRA-- 250
                  |.|     ...||       :.||   .|||.|..  ||| |.:.||:....|.:.|
  Fly   259 LAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHS--TNS-SSNHSIDPSSPAPENAKE 320

  Fly   251 ------------------ETQCGDRAL--TFLRVGPYSTVQPD-------------YKGAVSALC 282
                              |....|.::  |.....|::..:.|             |......:.
  Fly   321 INIAGGSVSSVSSSSPTMENDNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVY 385

  Fly   283 QVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIAN-VAWCSIVSLDDGGAGGGGGGL 346
            :...:.||..|::|:.:|.||::...||||||:.:|.||.:.| :.||  :.||..|.     .|
  Fly   386 ETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWC--IPLDPTGC-----AL 443

  Fly   347 ----GHDGSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRREL 407
                .|..:.|..:.|                ::.|.....|...|.|.|:..|.|.:.:|..|.
  Fly   444 FSVAEHCNNLENNANG----------------DTCITKEELAADVRTLHEIFCKYKAVLVDPAEF 492

  Fly   408 SCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKC 472
            :|||||:|:.|:.||:|..|:||..:::.:..|.:|.:.:......||.:|||.||.||.||...
  Fly   493 ACLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHK 557

  Fly   473 QDHLFLFRITSDRPLEELFLE 493
            .:.::..|...:.|:|::..:
  Fly   558 IESIYFQRTIGNTPMEKVLCD 578

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_001259168.1	NR_DBD_RXR	102..178	CDD:143514	40/86 (47%)
		NR_LBD_RXR_like	237..480	CDD:132741	71/282 (25%)
Hr51	NP_611032.2	NR_DBD_PNR	103..194	CDD:143528	43/90 (48%)
		NR_LBD_Tlx_PNR_like	354..569	CDD:132748	65/237 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444770
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24083
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
	4	3.940