Protein Alignment usp and Hnf4g

DIOPT Version :9

• Sequence 1: NP_001259168.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: XP_006530135.1
• Gene: Hnf4g / 30942
• MGIID: 1353604
• Length: 462
• Species: Mus musculus
• Alignment Length: 449
• Identity: 136/449 - (30%)
• Similarity: 210/449 - (46%)
• Gaps: 103/449 - (22%)

  Fly    71 QMAQAPNSAGGSAAAAVQQQYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKD 135
            |:...||.:......::      |...||...||:||||||:|||||..||:||||||:|::||.
Mouse    39 QILYNPNDSSAPETTSM------NTTDSGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKS 97

  Fly   136 LTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQR-GARNAAGRLSASGGGSSGP 199
            ..|:||.:|.|::||.:||:|:|||.:||...|||:||||.||.| ..|.:...      ||:.|
Mouse    98 HVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTYE------GSNIP 156

  Fly   200 GSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERIIEAEQRAETQCGDRALTFLRV 264
                                                   ||..:.:||.|:   |.      :.|
Mouse   157 ---------------------------------------SINTLAQAEVRS---CQ------ISV 173

  Fly   265 -GPYSTVQPDYK--GAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANV 326
             .|.|:...:.|  .::|.:|:.:.:||..:||:|:.:|.|.::||||||.||:|...|.|:...
Mouse   174 PSPSSSTDINIKKIASISDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGA 238

  Fly   327 AWCSIVSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDRILS 391
            ...|::..|                           .|.|...:..||||. :..||.:.:|:|.
Mouse   239 TKRSMMYKD---------------------------ILLLGNHYVIHRNSC-EVEVSRVANRVLD 275

  Fly   392 ELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFA 456
            ||....:.:.:|..|.:|||||:.::||.:|:....:|:..|.:|...|:::.........|||.
Mouse   276 ELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFG 340

  Fly   457 QLLLRLPALRSISLKCQDHLFLFR----ITSDRPLEELFL-------EQLEAPPPPGLA 504
            :|||.||.|:||:.:..:.:...:    :..|..|:|:.|       ..|..|..|.|:
Mouse   341 ELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGAANDGSHLHHPMHPHLS 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_001259168.1	NR_DBD_RXR	102..178	CDD:143514	46/75 (61%)
		NR_LBD_RXR_like	237..480	CDD:132741	69/245 (28%)
Hnf4g	XP_006530135.1	NR_DBD_HNF4A	66..141	CDD:143518	46/74 (62%)
		NR_LBD_HNF4_like	157..378	CDD:132729	71/257 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167834511
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840