Protein Alignment usp and nr2f1a

DIOPT Version :9

• Sequence 1: NP_001259168.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_571255.1
• Gene: nr2f1a / 30418
• ZFINID: ZDB-GENE-980526-115
• Length: 411
• Species: Danio rerio
• Alignment Length: 457
• Identity: 146/457 - (31%)
• Similarity: 208/457 - (45%)
• Gaps: 102/457 - (22%)

  Fly    61 SSNNNSAGDAQMAQAPNSAGGSAAAAVQQQYPPNHP-LSGSK----------HL-CSICGDRASG 113
            |..|.:|..|:..|...||.........|..||:.| .:|.|          |: |.:|||::||
Zfish    21 SGPNPAAQPAREQQQAASAAPHTPQTPSQPGPPSTPGTAGDKGSQNSGQSQQHIECVVCGDKSSG 85

  Fly   114 KHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEER 178
            ||||.::|||||.||||:||::|||.||.||||.||:..||:|||||.:|||..||:|||||..|
Zfish    86 KHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 150

  Fly   179 QRGARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERI 243
            ....:...|:.:.:.|...                          || ..:::..:|
Zfish   151 MPPTQPNPGQYALTNGDPL--------------------------NG-HCYLSGYIS-------- 180

  Fly   244 IEAEQRAETQCGDRALTFLRVGPYST-------VQPDYKGAVSALCQVVNKQLFQMVEYARMMPH 301
                            ..||..||.|       :||:....:..:|::..:.||..||:||.:|.
Zfish   181 ----------------LLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPF 229

  Fly   302 FAQVPLDDQVILLKAAWIELLIANVAWCSIVSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLF- 365
            |..:.:.|||.||:..|.||.:.|.|.||:                             |..:.
Zfish   230 FPDLQITDQVSLLRLTWSELFVLNAAQCSM-----------------------------PLHVAP 265

  Fly   366 LNQSFSYHRNSAIKAGVSAIFD--RILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAE 428
            |..:...|.:......|.|..|  ||..|...|:|.|::|..|.||:|||:|:..|..|:...|.
Zfish   266 LLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDACGLSDAAH 330

  Fly   429 IEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEELFLE 493
            ||..:||....|:|:.|.::|....||.:||||||:||::|....:.||..|:....|:|.|..:
Zfish   331 IESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRD 395

  Fly   494 QL 495
            .|
Zfish   396 ML 397

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_001259168.1	NR_DBD_RXR	102..178	CDD:143514	50/76 (66%)
		NR_LBD_RXR_like	237..480	CDD:132741	72/252 (29%)
nr2f1a	NP_571255.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..68		13/46 (28%)
		gliding_GltJ	<11..>59	CDD:411345	11/37 (30%)
		NR_DBD_COUP_TF	76..148	CDD:143516	48/71 (68%)
		NR_LBD_COUP-TF	174..409	CDD:132746	78/277 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910