Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_665723.1 | Gene: | Nr2c1 / 252924 | RGDID: | 3200 | Length: | 590 | Species: | Rattus norvegicus |
Alignment Length: | 525 | Identity: | 138/525 - (26%) |
---|---|---|---|
Similarity: | 214/525 - (40%) | Gaps: | 153/525 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 94 NHPLSGSK---HLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNR 155
Fly 156 CQYCRYQKCLTCGMKREAVQEERQ--RGARNAAGRLSAS-------------------------- 192
Fly 193 ----GGGSSG------PGSV-----------GGSSSQGGGG---------------------GGG 215
Fly 216 V-------SGGMGSGNGSDDFMTN-SVSRDF--------------------SIE---RIIEAE-- 247
Fly 248 --QRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQ 310
Fly 311 VILLKAAWIELLIANVAWC-----------SIVSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQL 364
Fly 365 FLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEI 429
Fly 430 EMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEELFLEQ 494
Fly 495 LEAPP 499 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 46/75 (61%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 64/280 (23%) | ||
Nr2c1 | NP_665723.1 | Required for interaction with KAT2B. /evidence=ECO:0000250 | 1..166 | 44/77 (57%) | |
NR_DBD_TR2_like | 96..182 | CDD:143525 | 48/85 (56%) | ||
NR_LBD_TR2_like | 355..576 | CDD:132750 | 59/254 (23%) | ||
Required for interaction with NRIP1. /evidence=ECO:0000250 | 571..590 | 2/8 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166338087 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |