Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001122482.2 | Gene: | unc-55 / 192082 | WormBaseID: | WBGene00006790 | Length: | 370 | Species: | Caenorhabditis elegans |
Alignment Length: | 462 | Identity: | 121/462 - (26%) |
---|---|---|---|
Similarity: | 188/462 - (40%) | Gaps: | 119/462 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 GSNSASSNNNSAGDAQMAQAPNSAGGSAAAAVQQQYPPNHPLSGSKHLCSICGDRASGKHYGVYS 120
Fly 121 CEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQEERQRGARNA 185
Fly 186 A--GRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERIIEAEQ 248
Fly 249 RAETQCGDRALTFLRV--GPYSTVQPDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQV 311
Fly 312 ILLKAAWIELLIANVAWCSI----------VSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLFL 366
Fly 367 NQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEM 431
Fly 432 CREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEELFLEQLE 496
Fly 497 APPPPGL 503 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 41/75 (55%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 52/254 (20%) | ||
unc-55 | NP_001122482.2 | NR_DBD_COUP_TF | 21..89 | CDD:143516 | 40/67 (60%) |
NR_LBD_F2 | 148..325 | CDD:132728 | 44/198 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 176 | 1.000 | Inparanoid score | I2694 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X118 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.960 |