Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_503987.1 | Gene: | nhr-221 / 188826 | WormBaseID: | WBGene00020748 | Length: | 398 | Species: | Caenorhabditis elegans |
Alignment Length: | 409 | Identity: | 84/409 - (20%) |
---|---|---|---|
Similarity: | 138/409 - (33%) | Gaps: | 132/409 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 97 LSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRN----RCQ 157
Fly 158 YCRYQKCLTCGMKREAV---------------QEERQRGARNAAGRLSASGGGSSGPGSVGGSSS 207
Fly 208 QGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERIIE-AEQRAETQCGDRALTFLRVGPYSTVQ 271
Fly 272 PDYKGAVSALC-------QVVNK---------------QLFQMVEYARMMPHFAQVPLDDQVILL 314
Fly 315 KAAWIELLIANVAWCSIVS-LDDGGAGGGGGGLGHDGSFERRSPGL-QPQQLFLNQSFSYHRNSA 377
Fly 378 IKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAE--IEMCREKVYACL 440
Fly 441 DEHCRLEHPGDDGRFAQLL 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 28/94 (30%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 49/250 (20%) | ||
nhr-221 | NP_503987.1 | ZnF_C4 | 33..105 | CDD:197701 | 27/74 (36%) |
NR_LBD | 176..>238 | CDD:299703 | 16/76 (21%) | ||
HOLI | 209..360 | CDD:214658 | 38/178 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158244 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |