Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506036.2 | Gene: | nhr-209 / 187663 | WormBaseID: | WBGene00011100 | Length: | 418 | Species: | Caenorhabditis elegans |
Alignment Length: | 478 | Identity: | 103/478 - (21%) |
---|---|---|---|
Similarity: | 185/478 - (38%) | Gaps: | 137/478 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 SAAAAVQQQYP------PNHPLSGSK--HLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTY 138
Fly 139 ACRENRNCI----IDKRQRNRCQYCRYQKCLTCGMKREAVQ------------EERQRGARNAAG 187
Fly 188 RLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERIIEAEQRAET 252
Fly 253 QCG---DRALT-FLRVGP------YSTVQPDYKGAVSALCQV-VNKQLFQMVEYARMMPHFAQVP 306
Fly 307 LDDQVILLKAAWIELLIANVAWCSI---------VSLDDGGAGGGGGGLGHDGSFERRSPGLQPQ 362
Fly 363 QLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMK---------RLNLDRRELSCLKAIILYNP 418
Fly 419 DIRG--IKSRAEIEMCREKVYACLDEHCRLEHPGDDG--RFAQLLLRLPALRSISLKCQD-HLFL 478
Fly 479 FRITSDR----PLEELFLEQLEA 497 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 30/91 (33%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 57/276 (21%) | ||
nhr-209 | NP_506036.2 | NR_DBD_HNF4A | 46..120 | CDD:143518 | 29/74 (39%) |
HOLI | 219..384 | CDD:214658 | 42/204 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158258 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |