Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001122887.1 | Gene: | nhr-129 / 183635 | WormBaseID: | WBGene00003719 | Length: | 420 | Species: | Caenorhabditis elegans |
Alignment Length: | 410 | Identity: | 85/410 - (20%) |
---|---|---|---|
Similarity: | 143/410 - (34%) | Gaps: | 116/410 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRN---RCQYCRYQKCL 165
Fly 166 TCGMKREAVQEERQRG--ARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDD 228
Fly 229 FMTNSV-SRDFSIERIIEAEQRAETQCGD-------------RALTFL-----------RVGPY- 267
Fly 268 ------STVQPDYKGAVSALCQVVNK--------------QLFQMVEYARMMPHFAQVPLDDQVI 312
Fly 313 LLKAAWIELLIANVAWCSIVSLDDGGAGGGGGGLGH-DGSFERRSPGLQPQQLFLNQSFSYHRNS 376
Fly 377 AIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMC--REKVYAC 439
Fly 440 LDEHCRLEHPGDDGRFAQLL 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 30/76 (39%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 50/271 (18%) | ||
nhr-129 | NP_001122887.1 | ZnF_C4 | 30..99 | CDD:197701 | 29/69 (42%) |
HOLI | 236..386 | CDD:214658 | 39/176 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158246 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |