Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506037.2 | Gene: | nhr-154 / 182565 | WormBaseID: | WBGene00007547 | Length: | 469 | Species: | Caenorhabditis elegans |
Alignment Length: | 511 | Identity: | 111/511 - (21%) |
---|---|---|---|
Similarity: | 186/511 - (36%) | Gaps: | 139/511 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 EEVKPDISQLNDSNNSSFSPKAESPVPFMQAMSMVHVLPGSNSASSNNNSAGDAQMAQAPNSAGG 81
Fly 82 SAAAAVQQQYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNC 146
Fly 147 I-----IDKRQRNRCQYCRYQKCLTCGMKREAVQEE--------------RQRGARNAAGRLSAS 192
Fly 193 GGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDDFMTNSVSRDFSIERIIEAEQRAETQCGDR 257
Fly 258 AL----TFLRVGPYSTVQ--PDYKGAVSA----------LCQVVNKQLFQMVEYARMMPHFAQVP 306
Fly 307 LDDQVILLKAAWIELLIANV--AWCSIVSL-------DDGGAGGGGGGLGHDGSFERRSPGLQPQ 362
Fly 363 QLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKS-- 425
Fly 426 RAEIEMCREKVYACLDEHCRLEHPGDDG--RFAQLLLRLPALRSISLKCQD-HLFL 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 30/94 (32%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 61/272 (22%) | ||
nhr-154 | NP_506037.2 | NR_DBD_HNF4A | 83..160 | CDD:143518 | 29/77 (38%) |
HOLI | 266..429 | CDD:214658 | 46/194 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158259 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |