Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504871.1 | Gene: | nhr-148 / 182172 | WormBaseID: | WBGene00015396 | Length: | 370 | Species: | Caenorhabditis elegans |
Alignment Length: | 432 | Identity: | 100/432 - (23%) |
---|---|---|---|
Similarity: | 150/432 - (34%) | Gaps: | 115/432 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRN----RCQYCRYQKC 164
Fly 165 LTCGMKREAVQ-EERQRG-------ARNAAG------------RLSASGGGSSGPGSVGGSSSQ- 208
Fly 209 --GGGGGGGVSGGMGSGNGSDDFMTNSVSRDF----SIERIIEAEQRAE-TQCGDRALTFLRVGP 266
Fly 267 YSTVQPDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSI 331
Fly 332 VSLDDGGAGGGGGGLGHDGSFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDR---ILSEL 393
Fly 394 SVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREK--VYACLDEHCRLEHPGDDGRFA 456
Fly 457 QLLLRLPALRSISLKCQDHLFLF---RITSDRPLEELFLEQL 495 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 34/78 (44%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 47/255 (18%) | ||
nhr-148 | NP_504871.1 | ZnF_C4 | 10..80 | CDD:197701 | 31/69 (45%) |
HOLI | 191..337 | CDD:214658 | 36/184 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158251 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |