Sequence 1: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034281.2 | Gene: | Nr2f1 / 13865 | MGIID: | 1352451 | Length: | 420 | Species: | Mus musculus |
Alignment Length: | 486 | Identity: | 150/486 - (30%) |
---|---|---|---|
Similarity: | 210/486 - (43%) | Gaps: | 99/486 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 ISQLNDSNNSSFSPKAESPVPFMQAMSMVHVLPGSNSASSNNNSAGDAQMAQAPNSAGGSA---A 84
Fly 85 AAVQQQYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIID 149
Fly 150 KRQRNRCQYCRYQKCLTCGMKREAVQEERQRGARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGG 214
Fly 215 GVSGGMGSGNGSDDFMTNSVSRDFSIERIIEAEQRAETQCGDRALTFLRVGPYST-------VQP 272
Fly 273 DYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSIVSLDDG 337
Fly 338 GAGGGGGGLGHDGSFERRSPGLQPQQLF-LNQSFSYHRNSAIKAGVSAIFD--RILSELSVKMKR 399
Fly 400 LNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPA 464
Fly 465 LRSISLKCQDHLFLFRITSDRPLEELFLEQL 495 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 49/75 (65%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 73/252 (29%) | ||
Nr2f1 | NP_034281.2 | NR_DBD_COUP_TF | 83..155 | CDD:143516 | 48/71 (68%) |
NR_LBD_COUP-TF | 181..416 | CDD:132746 | 79/277 (29%) | ||
Important for dimerization | 341..420 | 24/64 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X118 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |