DRSC/TRiP Functional Genomics Resources

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Protein Alignment usp and Eip75B

DIOPT Version :10

Sequence 1:NP_476781.1 Gene:usp / 31165 FlyBaseID:FBgn0003964 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_061517599.1 Gene:Eip75B / 1280470 VectorBaseID:AGAMI1_012295 Length:1448 Species:Anopheles gambiae


Alignment Length:469 Identity:128/469 - (27%)
Similarity:199/469 - (42%) Gaps:97/469 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SASSNNNSAGDAQMAQAP-------NSAGGSAAAAVQQQYP----PNHPLSGSKHLCSICGDRAS 112
            |:|......|.....|.|       .|.|||..:....:.|    |:....|:..||.:|||:||
Mosquito   322 SSSKQQQQHGHVTSMQPPPPPPPLKMSKGGSGGSGGGHEEPSSSMPDLEFDGTTVLCRVCGDKAS 386

  Fly   113 GKHYGVYSCEGCKGFFKRTVRKDLTY-ACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKREAVQE 176
            |.||||:|||||||||:|::::.:.| .|.:|:.|.|.:..||||||||.:||:..||.|:||:.
Mosquito   387 GFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRF 451

  Fly   177 ERQRGARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNGSDD--------FMTNS 233
            .|. ..|..|..|:|....:...|:....:|:                 .||        ...:.
Mosquito   452 GRV-PKREKARILAAMQQSTQNRGNQRALASE-----------------LDDQPRLLASVLQAHI 498

  Fly   234 VSRDFSIERIIEAEQRAETQCGDRALTFLR--VGPYSTVQPDYKGAVSALCQVVNKQLFQMVEYA 296
            .:.:|:.|::....|||. .|...::..|.  :.|...:|.:.:.: .....|:.    .::::|
Mosquito   499 ETCEFTREKVAAMRQRAR-DCPSYSMPTLACPLNPAPELQSEQEFS-QRFAHVIR----GVIDFA 557

  Fly   297 RMMPHFAQVPLDDQVILLKAAWIELLIANVAWC-------SIVSLDDGGAGGGGGGLGHDGSFER 354
            .|:|.|..:..||:..||||...:.|...:. |       ||:.|              :|...|
Mosquito   558 GMIPGFQLLTQDDKFTLLKAGLFDALFVRLI-CMFDTSINSIICL--------------NGQVMR 607

  Fly   355 RSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIF--DRILSELSVKMKRLNLDRRELSCLKAIILYN 417
            |                    ..|:.|.:|.|  |...: .:.:|..:.|...|:....||:|..
Mosquito   608 R--------------------DTIQNGANARFLVDSTFN-FAERMNSMQLTDAEIGLFCAIVLIT 651

  Fly   418 PDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLR-LPALRSISLKCQDHLFLFRI 481
            ||..|:::...||....|:.|||........| |...|.|.||| :|.||::|....:.|.:||.
Mosquito   652 PDRPGLRNVELIERMYTKLKACLQSVISQNRP-DKPEFMQELLRTMPDLRTLSTLHTEKLVVFRT 715

  Fly   482 TSDRPLEELFLEQL 495
            ..    :||..:|:
Mosquito   716 EH----KELLRQQM 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
uspNP_476781.1 NR_DBD_RXR 102..178 CDD:143514 42/76 (55%)
NR_LBD_RXR_like 237..480 CDD:132741 60/254 (24%)
Eip75BXP_061517599.1 None

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