Protein Alignment usp and nr2f2

DIOPT Version :10

• Sequence 1: NP_476781.1
• Gene: usp / 31165
• FlyBaseID: FBgn0003964
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: XP_012813815.1
• Gene: nr2f2 / 100038039
• XenbaseID: XB-GENE-482566
• Length: 415
• Species: Xenopus tropicalis
• Alignment Length: 475
• Identity: 145/475 - (30%)
• Similarity: 208/475 - (43%)
• Gaps: 121/475 - (25%)

  Fly    54 LPGSNSASSNNNSAGDAQMAQAPNSA--------GGSAAAAVQQQYPPNHPL--SGSK-----HL 103
            :||:..:        .|...|.||.|        .|..:....|..|.:.|.  .|.|     |:
 Frog    15 MPGTQPS--------QAPPGQGPNGAPHTPQTPGQGVPSTTPAQSNPSSQPSQNQGEKQQQQQHI 71

  Fly   104 -CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTC 167
             |.:|||::||||||.::|||||.||||:||::|||.||.||||.||:..||:|||||.:|||..
 Frog    72 ECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKV 136

  Fly   168 GMKRE-------AVQEERQRGARNAAGRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSGNG 225
            ||:||       |||..|....:...|:.:.:.|......|
 Frog   137 GMRREVSSLFTAAVQRGRMPPTQPTHGQFALTNGDPLNCHS------------------------ 177

  Fly   226 SDDFMTNSVSRDFSIERIIEAEQRAETQCGDRALTFLRVGPYST-------VQPDYKGAVSALCQ 283
               :::..:|                        ..||..||.|       :||:....:..:|:
 Frog   178 ---YLSGYIS------------------------LLLRAEPYPTSRFGSQCMQPNNIMGIENICE 215

  Fly   284 VVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSIVSLDDGGAGGGGGGLGH 348
            :..:.||..||:||.:|.|..:.:.|||.||:..|.||.:.|.|.||:
 Frog   216 LAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSM----------------- 263

  Fly   349 DGSFERRSPGLQPQQLF-LNQSFSYHRNSAIKAGVSAIFD--RILSELSVKMKRLNLDRRELSCL 410
                        |..:. |..:...|.:......|.|..|  ||..|...|:|.|::|..|.|||
 Frog   264 ------------PLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCL 316

  Fly   411 KAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDH 475
            |||:|:..|..|:...|.:|..:||....|:|:.|.::|....||.:||||||:||::|....:.
 Frog   317 KAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQ 381

  Fly   476 LFLFRITSDRPLEELFLEQL 495
            ||..|:....|:|.|..:.|
 Frog   382 LFFVRLVGKTPIETLIRDML 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
usp	NP_476781.1	NR_DBD_RXR	102..178	CDD:143514	50/83 (60%)
		NR_LBD_RXR_like	237..480	CDD:132741	72/252 (29%)
nr2f2	XP_012813815.1	gly_rich_SclB	<9..54	CDD:468478	9/46 (20%)
		NR_DBD_COUP_TF	73..143	CDD:143516	46/69 (67%)
		NR_LBD_COUP-TF	178..413	CDD:132746	78/277 (28%)