Protein Alignment Hr4 and nhr-138

DIOPT Version :9

• Sequence 1: NP_001259161.1
• Gene: Hr4 / 31162
• FlyBaseID: FBgn0264562
• Length: 2123
• Species: Drosophila melanogaster
• Sequence 2: NP_501730.3
• Gene: nhr-138 / 3565904
• WormBaseID: WBGene00003728
• Length: 410
• Species: Caenorhabditis elegans
• Alignment Length: 89
• Identity: 38/89 - (42%)
• Similarity: 56/89 - (62%)
• Gaps: 1/89 - (1%)

  Fly   907 APHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRN 971
            :|| |...::....|::|.|.....|||.:.|.||||||:|:|..:|.|.|:|:..||:.:..||
 Worm     2 SPH-PRVLNDNNRRCLVCGDDKASRHYGTVACNGCKGFFRRSVWEKRTYFCIANEDCEVLQQFRN 65

  Fly   972 RCQYCRFKKCIEQGMVLQAVREDR 995
            ||:.|||.||:..||..:||:.:|
 Worm    66 RCRACRFNKCVMVGMDARAVQSER 89

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr4	NP_001259161.1	NR_DBD_DHR4_like	913..1002	CDD:143542	35/83 (42%)
		NR_LBD_DHR4_like	1256..1515	CDD:132751
nhr-138	NP_501730.3	NR_DBD_HNF4A	15..90	CDD:143518	35/75 (47%)
		HOLI	205..374	CDD:214658

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E33208_3B99I
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900