DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tox2 and Dsp1

DIOPT Version :10

Sequence 1:NP_955424.2 Gene:Tox2 / 311615 RGDID:735184 Length:515 Species:Rattus norvegicus
Sequence 2:NP_001138203.1 Gene:Dsp1 / 117294 FlyBaseID:FBgn0278608 Length:397 Species:Drosophila melanogaster


Alignment Length:223 Identity:53/223 - (23%)
Similarity:84/223 - (37%) Gaps:48/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Rat   173 QSQLISQMGLRSGIAHSSP--------SPPGSKSATPSPSSSTQEEESDAH-------------- 215
            |.|:..|...::.|..:||        .|.|..:|......:.:||....|              
  Fly   155 QQQMQQQQQQQNVINSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKC 219

  Rat   216 -----FKISGEKRPSTDPGKKAKN-----------PK-------KKKK--KDPNEPQKPVSAYAL 255
                 ..:..||:...:..:|.|.           ||       ||:|  ||||.|::.:||:..
  Fly   220 AERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFW 284

  Rat   256 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRAS-LVS 319
            |..|.:..:|..||....||::|.:...|..:..|.||.|:...|..|..|.:.:..|:.| .::
  Fly   285 FCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIA 349

  Rat   320 KSPPDQGEAKNAQANPPAKMLPPKQPMY 347
            .|.|....:..|||...|.:....|..:
  Fly   350 MSAPSMQASMQAQAQKAALLAAAAQQQH 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tox2NP_955424.2 HMG-box_TOX-like 247..316 CDD:438811 19/68 (28%)
Dsp1NP_001138203.1 HMG-box_HMGB_rpt1 182..250 CDD:438794 10/67 (15%)
HMG-box_NHP6-like 262..342 CDD:438792 26/79 (33%)

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