DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11596 and Carnmt1

DIOPT Version :10

Sequence 1:NP_726779.1 Gene:CG11596 / 31158 FlyBaseID:FBgn0023522 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001020145.1 Gene:Carnmt1 / 293871 RGDID:1311863 Length:400 Species:Rattus norvegicus


Alignment Length:369 Identity:158/369 - (42%)
Similarity:224/369 - (60%) Gaps:19/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EEEEEKHIQKVQNAFLYYGPYACQRLKRSMDYLNSLSGEDQIMLAKYRGHLECVRTCIDRNQAVI 91
            |..|.:|..||.|||.|||....:|:.|:.....||....|.:|.::..||:.:|.|:|.||.::
  Rat    50 ERLEREHFWKVINAFRYYGTSMHERVNRTERQFRSLPDNQQKLLPQFPLHLDKIRKCVDHNQEIL 114

  Fly    92 REILRGRVLYPTDEATGDPSEFDEPPPNVRHGDMDQIDIPFDEADVEPLKILKAQSTLKLIARDW 156
            ..|:...:....::..|:              |.:...:|....|::.||     ||||...|||
  Rat   115 LTIVNDCIHMFENKEYGE--------------DANGKIMPASTFDMDKLK-----STLKQFVRDW 160

  Fly   157 STEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPGAGLGRLTYELACLGYSCEGNEFSYFM 221
            |..|..||:..|||||..|:..|....::...:.|||||||||||.:|:|.|||:|:|||:|:||
  Rat   161 SGTGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGRLAWEIAMLGYACQGNEWSFFM 225

  Fly   222 LIASNFVLNLCDNENKYVLYPWVHQYVNNLRREDQVAPVRFPDVCPLKNPPKGHFEIAAGDFLEV 286
            |.:||||||.|...:||.||||:||:.||.|..||:.|:.||||.|...||..:|.:.||||.|:
  Rat   226 LFSSNFVLNRCSEVDKYKLYPWIHQFSNNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQEI 290

  Fly   287 YKTPNAYNCVATCFFIDCANNVIDFIRTIYKILVPGGIWVNLGPLLYHFSDVSGQNSIEPAFEDL 351
            |...|.::|:|||||||.|:||||:|.||::||.|||||:|||||||||.:::.:.|||.::||:
  Rat   291 YSECNTWDCIATCFFIDTAHNVIDYIDTIWRILKPGGIWINLGPLLYHFENLANELSIELSYEDI 355

  Fly   352 CIIMESVGFVIEKSRTGIRTKYAQNPSSMKQSEYQSLFWVCRKP 395
            ..::...||.:|..:..:.:.|..|..||.:..|:.:.:|.|||
  Rat   356 KNVVLQYGFQLEVEKESVLSTYTVNDLSMMKYYYECVLFVVRKP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11596NP_726779.1 CARME 114..396 CDD:400340 132/282 (47%)
Carnmt1NP_001020145.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
CARME 135..400 CDD:400340 131/270 (49%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.